Park Sa-Yoon, Park Ji-Hun, Kim Hyo-Su, Lee Choong-Yeol, Lee Hae-Jeung, Kang Ki Sung, Kim Chang-Eop
Department of Physiology, College of Korean Medicine, Gachon University, Seongnam, Republic of Korea.
Department of Food and Nutrition, College of BioNano Technology, Gachon University, Seongnam, Republic of Korea.
J Ginseng Res. 2018 Jan;42(1):98-106. doi: 10.1016/j.jgr.2017.09.001. Epub 2017 Oct 16.
has been used since ancient times based on the traditional Asian medicine theory and clinical experiences, and currently, is one of the most popular herbs in the world. To date, most of the studies concerning have focused on specific mechanisms of action of individual constituents. However, in spite of many studies on the molecular mechanisms of , it still remains unclear how multiple active ingredients of interact with multiple targets simultaneously, giving the multidimensional effects on various conditions and diseases. In order to decipher the systems-level mechanism of multiple ingredients of , a novel approach is needed beyond conventional reductive analysis. We aim to review the systems-level mechanism of by adopting novel analytical framework-network pharmacology. Here, we constructed a compound-target network of using experimentally validated and machine learning-based prediction results. The targets of the network were analyzed in terms of related biological process, pathways, and diseases. The majority of targets were found to be related with primary metabolic process, signal transduction, nitrogen compound metabolic process, blood circulation, immune system process, cell-cell signaling, biosynthetic process, and neurological system process. In pathway enrichment analysis of targets, mainly the terms related with neural activity showed significant enrichment and formed a cluster. Finally, relative degrees analysis for the target-disease association of revealed several categories of related diseases, including respiratory, psychiatric, and cardiovascular diseases.
自古以来,它就基于传统亚洲医学理论和临床经验被使用,目前是世界上最受欢迎的草药之一。迄今为止,大多数关于它的研究都集中在单个成分的具体作用机制上。然而,尽管对其分子机制进行了许多研究,但仍不清楚它的多种活性成分如何同时与多个靶点相互作用,从而对各种病症和疾病产生多维度影响。为了解析它多种成分的系统水平机制,需要一种超越传统还原分析的新方法。我们旨在通过采用新的分析框架——网络药理学来综述它的系统水平机制。在此,我们利用实验验证和基于机器学习的预测结果构建了它的化合物-靶点网络。从相关生物学过程、通路和疾病方面对该网络的靶点进行了分析。发现大多数靶点与初级代谢过程、信号转导、氮化合物代谢过程、血液循环、免疫系统过程、细胞间信号传导、生物合成过程和神经系统过程有关。在靶点的通路富集分析中,主要是与神经活动相关的术语显示出显著富集并形成一个簇。最后,对它的靶点-疾病关联的相对度分析揭示了几类相关疾病,包括呼吸系统、精神和心血管疾病。