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揭示 Dot/Icm 型 IVb 分泌系统效应子功能的工具箱:现状与未来方向。

The Toolbox for Uncovering the Functions of Dot/Icm Type IVb Secretion System Effectors: Current State and Future Directions.

机构信息

Centre for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, Belfast, United Kingdom.

出版信息

Front Cell Infect Microbiol. 2018 Jan 5;7:528. doi: 10.3389/fcimb.2017.00528. eCollection 2017.

Abstract

The defective in organelle trafficking/intracellular multiplication (Dot/Icm) Type IVb secretion system (T4SS) is the essential virulence factor for the intracellular life style and pathogenicity of species. Screens demonstrated that an individual strain can use the Dot/Icm T4SS to translocate an unprecedented number of more than 300 proteins into host cells, where these, so called Icm/Dot-translocated substrates (IDTS) or effectors, manipulate host cell functions to the benefit of the bacteria. Bioinformatic analysis of the pan-genus genome predicts at least 608 orthologous groups of putative effectors. Deciphering the function of these effectors is key to understanding pathogenesis; however, the analysis is challenging. Substantial functional redundancy renders classical, phenotypic screening of single gene deletion mutants mostly ineffective. Here, I review experimental approaches that were successfully used to identify, validate and functionally characterize T4SS effectors and highlight new methods, which promise to facilitate unlocking the secrets of 's extraordinary weapons arsenal.

摘要

在细胞器运输/细胞内繁殖(Dot/Icm)IVb 型分泌系统(T4SS)缺陷的情况下,物种的细胞内生活方式和致病性的关键毒力因子。筛选表明,单个菌株可以利用 Dot/Icm T4SS 将超过 300 种蛋白质以前所未有的数量转运到宿主细胞中,这些所谓的 Icm/Dot 转运底物(IDTS)或效应物,操纵宿主细胞的功能,使细菌受益。泛基因组基因组的生物信息学分析预测至少有 608 个假定效应物的直系同源群。破译这些效应物的功能是理解发病机制的关键;然而,分析具有挑战性。大量的功能冗余使得经典的、表型筛选单个基因缺失突变体的方法大多无效。在这里,我回顾了成功用于鉴定、验证和功能表征 T4SS 效应物的实验方法,并强调了新的方法,这些方法有望促进解开“的非凡武器库的秘密。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0066/5760550/edf14d7ce2ef/fcimb-07-00528-g0001.jpg

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