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利用大数据进行教学:2016年神经科学学会教学研讨会报告

Teaching with Big Data: Report from the 2016 Society for Neuroscience Teaching Workshop.

作者信息

Grisham William, Brumberg Joshua C, Gilbert Terri, Lanyon Linda, Williams Robert W, Olivo Richard

机构信息

Psychology Department, University of California, Los Angeles (UCLA), Los Angeles, CA 90095-1563.

Department of Psychology, The City University of New York (CUNY): The Graduate Center and Queens College, Queens, NY 11367.

出版信息

J Undergrad Neurosci Educ. 2017 Nov 15;16(1):A68-A76. eCollection 2017 Fall.

Abstract

As part of a series of workshops on teaching neuroscience at the Society for Neuroscience annual meetings, William Grisham and Richard Olivo organized the 2016 workshop on "Teaching Neuroscience with Big Data." This article presents a summary of that workshop. Speakers provided overviews of open datasets that could be used in teaching undergraduate courses. These included resources that already appear in educational settings, including the Allen Brain Atlas (presented by Joshua Brumberg and Terri Gilbert), and the Mouse Brain Library and GeneNetwork (presented by Robert Williams). Other resources, such as NeuroData (presented by William R. Gray Roncal), and OpenFMRI, NeuroVault, and Neurosynth (presented by Russell Poldrack) have not been broadly utilized by the neuroscience education community but offer obvious potential. Finally, William Grisham discussed the iNeuro Project, an NSF-sponsored effort to develop the necessary curriculum for preparing students to handle Big Data. Linda Lanyon further elaborated on the current state and challenges in educating students to deal with Big Data and described some training resources provided by the International Neuroinformatics Coordinating Facility. Neuroinformatics is a subfield of neuroscience that deals with data utilizing analytical tools and computational models. The feasibility of offering neuroinformatics programs at primarily undergraduate institutions was also discussed.

摘要

作为神经科学学会年会上一系列神经科学教学研讨会的一部分,威廉·格里沙姆和理查德·奥利沃组织了2016年关于“利用大数据进行神经科学教学”的研讨会。本文介绍了该研讨会的总结。发言者概述了可用于本科教学课程的开放数据集。这些包括已经在教育环境中出现的资源,如艾伦脑图谱(由约书亚·布伦伯格和特里·吉尔伯特介绍)、小鼠脑库和基因网络(由罗伯特·威廉姆斯介绍)。其他资源,如NeuroData(由威廉·R·格雷·龙卡尔介绍)、OpenFMRI、NeuroVault和Neurosynth(由拉塞尔·波德拉克介绍),尚未被神经科学教育界广泛使用,但具有明显的潜力。最后,威廉·格里沙姆讨论了iNeuro项目,这是一项由美国国家科学基金会资助的项目,旨在开发必要的课程,让学生为处理大数据做好准备。琳达·兰扬进一步阐述了在教育学生应对大数据方面的现状和挑战,并介绍了国际神经信息学协调设施提供的一些培训资源。神经信息学是神经科学的一个子领域,它利用分析工具和计算模型处理数据。会上还讨论了在主要本科院校开设神经信息学课程的可行性。

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