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[西伯利亚云杉种群在核微卫星位点的遗传多样性与分化]

[Genetic diversity and differentiation of Siberian spruce populations at nuclear microsatellite loci].

作者信息

Kravchenko A N, Ekart A K, Larionova A Ya

出版信息

Genetika. 2016 Nov;52(11):1262-9.

PMID:29372789
Abstract

The results of the study of 21 populations of Siberian spruce (Picea obovata Ledeb.) from different parts of the species natural range by microsatellite (SSR) analysis of nuclear DNA are presented. Using nine loci developed for Picea abies (L.) Karst. and Picea glauca (Moench) Voss and detecting variation in Picea obovata, the parameters of intra- and interpopulation genetic diversity, as well as the degree of population differentiation, were determined. It was demonstrated that the population of Siberian spruce in the study was characterized by a relatively high average level of intrapopulation variability (H o = 0.408; H e = 0.423) and low interpopulation differentiation (F st = 0.048, P = 0.001) at this class of DNA markers. The genetic distance between populations ranged from 0.009 to 0.167, averaging 0.039. The isolated Magadan population, located in the extreme Northeast of Russia at a considerable distance from the main species range and characterized by the lowest genetic diversity among the studied populations, was maximally differentiated from the rest of the spruce populations. In addition, the steppe Ubukun population from Buryatia and the population from the Bogd Khan Uul Biosphere Reserve, Mongolia, were considerably different in the genetic structure from most populations of Siberian spruce, although to a lesser extent than the Magadan population. These findings are consistent with the results of previous studies of this species carried out using allozyme and microsatellite loci of chloroplast DNA and point to the prospects of using nuclear microsatellites as DNA markers to analyze the population genetic structure of Siberian spruce.

摘要

本文展示了通过对21个来自西伯利亚云杉(Picea obovata Ledeb.)物种自然分布区不同部位种群的核DNA进行微卫星(SSR)分析的研究结果。利用为欧洲云杉(Picea abies (L.) Karst.)和白云杉(Picea glauca (Moench) Voss)开发的9个位点,并检测西伯利亚云杉的变异,确定了种群内和种群间遗传多样性参数以及种群分化程度。结果表明,在所研究的此类DNA标记中,西伯利亚云杉种群具有相对较高的种群内变异平均水平(H o = 0.408;H e = 0.423)和较低的种群间分化(F st = 0.048,P = 0.001)。种群间的遗传距离在0.009至0.167之间,平均为0.039。位于俄罗斯最东北部、与主要物种分布区相距甚远且在所研究种群中遗传多样性最低的孤立的马加丹种群,与其他云杉种群的分化程度最大。此外,来自布里亚特的草原乌布昆种群以及蒙古博格多汗山生物圈保护区的种群,其遗传结构与大多数西伯利亚云杉种群有很大差异,尽管程度小于马加丹种群。这些发现与此前使用叶绿体DNA的等位酶和微卫星位点对该物种进行研究的结果一致,并指出了利用核微卫星作为DNA标记来分析西伯利亚云杉种群遗传结构的前景。

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