Department of General Surgery, Huzhou Central Hospital, Huzhou, People's Republic of China.
Department of General Surgery, The Affiliated Yantai Yuhuangding Hospital of Qingdao University, Yantai, People's Republic of China.
J Exp Clin Cancer Res. 2018 Jan 27;37(1):13. doi: 10.1186/s13046-018-0684-8.
Recently, the pesudogenes have emerged as critical regulators in human cancers tumorigenesis and progression, and been identified as a key revelation in post-genomic biology. However, the expression pattern, biological function and mechanisms responsible for these molecules in human gastric cancer (GC) are not fully understood.
In this study, we globally assessed the transcriptomic differences of pesudogenes in gastric cancer using publicly available microarray data. DUXAP10 expression levels in GC tissues and cells was detected using quantitative real-time PCR (qPCR). DUXAP10 siRNAs and over-expression vector were transfected into GC cells to down-regulate or up-regulate DUXAP10 expression. Loss- and gain-of function assays were performed to investigate the role of DUXAP10 in GC cells cell proliferation, and invasion. RIP, RNA pulldown, and ChIP assays were used to determine the mechanism of DUXAP10's regulation of underlying targets.
The pesudogene DUXAP10 is the only pseudogene that significantly over-expressed in all four GEO datasets, and frequently over-expressed in many other cancers including Liver Hepatocellular carcinoma, Bladder cancer, and Esophageal Cancer. High DUXAP10 expression is associated with GC patients poor prognosis, and knockdown of DUXAP10 significantly inhibits cells proliferation, migration and invasion in GC. Mechanistic investigation shows that DUXAP10 can interact with PRC2 and LSD1 to repress LATS1 expression at transcriptional level, and bind with HuR to maintain the stability of β-catenin mRNA and increase its protein levels at post-transcriptional level.
Overall, our findings illuminate how increased DUXAP10 confers an oncogenic function in GC development and progression that may serve as a candidate prognostic biomarker and target for clinical management of GC.
最近,假基因已成为人类癌症发生和发展的关键调控因子,并被确定为后基因组生物学的一个重要发现。然而,这些分子在人类胃癌(GC)中的表达模式、生物学功能和机制尚不完全清楚。
在这项研究中,我们使用公开的微阵列数据全面评估了假基因在胃癌中的转录组差异。使用定量实时 PCR(qPCR)检测 GC 组织和细胞中 DUXAP10 的表达水平。将 DUXAP10 siRNAs 和过表达载体转染到 GC 细胞中,下调或上调 DUXAP10 的表达。进行缺失和获得功能实验,以研究 DUXAP10 在 GC 细胞增殖和侵袭中的作用。使用 RIP、RNA 下拉和 ChIP 实验来确定 DUXAP10 调节潜在靶标的机制。
假基因 DUXAP10 是唯一一个在所有四个 GEO 数据集均显著过表达的假基因,并且在许多其他癌症中经常过表达,包括肝癌、膀胱癌和食管癌。高 DUXAP10 表达与 GC 患者预后不良相关,敲低 DUXAP10 可显著抑制 GC 细胞的增殖、迁移和侵袭。机制研究表明,DUXAP10 可以与 PRC2 和 LSD1 相互作用,在转录水平上抑制 LATS1 的表达,并与 HuR 结合,维持β-catenin mRNA 的稳定性并增加其蛋白水平在转录后水平。
总体而言,我们的研究结果阐明了 DUXAP10 的增加如何在 GC 的发生和发展中赋予致癌功能,这可能成为 GC 临床管理的候选预后生物标志物和靶标。