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用于基于人群的图像分析的快速测地线回归

Fast Geodesic Regression for Population-Based Image Analysis.

作者信息

Hong Yi, Golland Polina, Zhang Miaomiao

机构信息

Computer Science Department, University of Georgia, Athens, USA.

Computer Science and Artificial Intelligence Laboratory, MIT, Cambridge, USA.

出版信息

Med Image Comput Comput Assist Interv. 2017 Sep;10433:317-325. doi: 10.1007/978-3-319-66182-7_37. Epub 2017 Sep 4.

DOI:10.1007/978-3-319-66182-7_37
PMID:29379899
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5786174/
Abstract

Geodesic regression on images enables studies of brain development and degeneration, disease progression, and tumor growth. The high-dimensional nature of image data presents significant computational challenges for the current regression approaches and prohibits large scale studies. In this paper, we present a fast geodesic regression method that dramatically decreases the computational cost of the inference procedure while maintaining prediction accuracy. We employ an efficient low dimensional representation of diffeomorphic transformations derived from the image data and characterize the regressed trajectory in the space of diffeomorphisms by its initial conditions, i.e., an initial image template and an initial velocity field computed as a weighted average of pairwise diffeomorphic image registration results. This construction is achieved by using a first-order approximation of pairwise distances between images. We demonstrate the efficiency of our model on a set of 3D brain MRI scans from the OASIS dataset and show that it is dramatically faster than the state-of-the-art regression methods while producing equally good regression results on the large subject cohort.

摘要

图像上的测地线回归能够用于研究大脑发育与退化、疾病进展以及肿瘤生长。图像数据的高维特性给当前的回归方法带来了重大的计算挑战,并且阻碍了大规模研究。在本文中,我们提出了一种快速测地线回归方法,该方法在保持预测准确性的同时,显著降低了推理过程的计算成本。我们采用了一种从图像数据中导出的微分同胚变换的高效低维表示,并通过其初始条件,即在微分同胚空间中作为成对微分同胚图像配准结果的加权平均值计算得到的初始图像模板和初始速度场,来表征回归轨迹。这种构建是通过使用图像之间成对距离的一阶近似来实现的。我们在一组来自OASIS数据集的3D脑部MRI扫描图像上展示了我们模型的效率,并表明它比当前最先进的回归方法快得多,同时在大型受试者队列上产生同样良好的回归结果。

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本文引用的文献

1
Finite-Dimensional Lie Algebras for Fast Diffeomorphic Image Registration.用于快速微分同胚图像配准的有限维李代数
Inf Process Med Imaging. 2015;24:249-59. doi: 10.1007/978-3-319-19992-4_19.
2
Splines for diffeomorphisms.样条曲线的微分同胚。
Med Image Anal. 2015 Oct;25(1):56-71. doi: 10.1016/j.media.2015.04.012. Epub 2015 Apr 18.
3
Metamorphic geodesic regression.变质测地线回归
用于校正 4DCT 肺部呼吸运动伪影的测地密度回归。
Med Image Anal. 2021 Aug;72:102140. doi: 10.1016/j.media.2021.102140. Epub 2021 Jun 21.
4
Fast predictive simple geodesic regression.快速预测简单测地线回归。
Med Image Anal. 2019 Aug;56:193-209. doi: 10.1016/j.media.2019.06.003. Epub 2019 Jun 12.
Med Image Comput Comput Assist Interv. 2012;15(Pt 3):197-205. doi: 10.1007/978-3-642-33454-2_25.
4
Geodesic regression for image time-series.图像时间序列的测地线回归
Med Image Comput Comput Assist Interv. 2011;14(Pt 2):655-62. doi: 10.1007/978-3-642-23629-7_80.
5
Geodesic Shooting for Computational Anatomy.用于计算解剖学的测地线射击法
J Math Imaging Vis. 2006 Jan 31;24(2):209-228. doi: 10.1007/s10851-005-3624-0.
6
Spatiotemporal atlas estimation for developmental delay detection in longitudinal datasets.用于纵向数据集中发育迟缓检测的时空图谱估计
Med Image Comput Comput Assist Interv. 2009;12(Pt 1):297-304. doi: 10.1007/978-3-642-04268-3_37.