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基于 DNA zyme 作为信号探针的牡蛎样本中诺如病毒的比色检测。

Colorimetric Detection of Norovirus in Oyster Samples through DNAzyme as a Signaling Probe.

机构信息

Department of Food and Nutrition, College of Biotechnology and Natural Resources , Chung-Ang University , Anseong , Gyounggi 17546 , Republic of Korea.

Department of Agricultural Chemistry and Food Science and Technology , Gyeongsang National University , 900 Gajwa-dong , Jinju , Gyeongnam 660-701 , Republic of Korea.

出版信息

J Agric Food Chem. 2018 Mar 21;66(11):3003-3008. doi: 10.1021/acs.jafc.7b05289. Epub 2018 Feb 13.


DOI:10.1021/acs.jafc.7b05289
PMID:29381353
Abstract

Worldwide, norovirus is one of the most associated causes of acute gastroenteritis, which leads to nearly 50 000 child deaths every year in developing countries. Therefore, there is great demand to develop a rapid, low-cost, and accurate detection assay for the foodborne norovirus infection to reduce mortality caused by norovirus. Considering the importance of norovirus, we have demonstrated a highly sensitive and specific colorimetric detection method for analysis of human norovirus genogroups I and II (HuNoV GI and GII) in oyster samples. This is the first report to employ colorimetric HRPzyme-integrated polymerase chain reaction (PCR) for direct norovirus detection from the real shellfish samples. We found that the HRPzyme-integrated PCR method is more sensitive than the gel electrophoresis approach and could detect the HuNoV GI and GII genome up to 1 copy/mL. The specificity of the proposed method was successfully demonstrated for HuNoV GI and GII. Further, we performed testing HuNoVs in the spiked oyster samples, and the HRPzyme-integrated PCR method proved to be an ultrasensitive and selective method for detecting HuNoVs in the real samples. By integration of the proposed method with the portable PCR machine, it would be more reliable to improve food safety by detecting HuNoVs in the different types of shellfish, such as oyster and mussel, at the production field.

摘要

在全球范围内,诺如病毒是导致急性肠胃炎的最主要原因之一,每年发展中国家因此病导致近 50000 名儿童死亡。因此,开发一种快速、低成本、准确的食源诺如病毒感染检测方法来降低由诺如病毒引起的死亡率的需求很大。鉴于诺如病毒的重要性,我们已经开发了一种用于牡蛎样本中人类诺如病毒基因 I 和 II 组(HuNoV GI 和 GII)分析的高灵敏度和特异性比色检测方法。这是首次报道采用比色 HRPzyme-整合聚合酶链反应(PCR)直接从实际贝类样本中检测诺如病毒。我们发现 HRPzyme-整合 PCR 方法比凝胶电泳方法更灵敏,能够检测到 HuNoV GI 和 GII 基因组低至 1 拷贝/mL。该方法的特异性已成功用于 HuNoV GI 和 GII。此外,我们对添加了 HuNoVs 的牡蛎样本进行了测试,HRPzyme-整合 PCR 方法被证明是一种超灵敏和选择性的方法,可用于检测实际样本中的 HuNoVs。通过将该方法与便携式 PCR 机集成,将更可靠地通过在生产现场检测不同类型的贝类(如牡蛎和贻贝)中的 HuNoVs 来提高食品安全。

相似文献

[1]
Colorimetric Detection of Norovirus in Oyster Samples through DNAzyme as a Signaling Probe.

J Agric Food Chem. 2018-2-13

[2]
Prevalence and Molecular Genotyping of Noroviruses in Market Oysters, Mussels, and Cockles in Bangkok, Thailand.

Food Environ Virol. 2016-6

[3]
Distribution of Naturally Occurring Norovirus Genogroups I, II, and IV in Oyster Tissues.

Food Environ Virol. 2017-12

[4]
Norovirus Monitoring in Oysters Using Two Different Extraction Methods.

Food Environ Virol. 2019-7-24

[5]
A rapid and efficient method for quantitation of genogroups I and II norovirus from oysters and application in other complex environmental samples.

J Virol Methods. 2009-3

[6]
Detection of noroviruses in shellfish in the Netherlands.

Int J Food Microbiol. 2006-5-1

[7]
Development of a method for direct extraction of viral RNA from bivalve molluscs.

Lett Appl Microbiol. 2018-11

[8]
Pyrosequencing Analysis of Norovirus Genogroup II Distribution in Sewage and Oysters: First Detection of GII.17 Kawasaki 2014 in Oysters.

Food Environ Virol. 2016-12

[9]
Norovirus detection in shellfish using two Real-Time RT-PCR methods.

New Microbiol. 2011-1

[10]
[Study on the use of TaqMan Real-time PCR to detect genogroup I and II norovirus in oysters and patients' stool samples].

Zhonghua Liu Xing Bing Xue Za Zhi. 2008-6

引用本文的文献

[1]
Colorimetric Sensors for Chemical and Biological Sensing Applications.

Sensors (Basel). 2023-3-2

[2]
Construction and Application of DNAzyme-based Nanodevices.

Chem Res Chin Univ. 2023

[3]
Recent advances in airborne pathogen detection using optical and electrochemical biosensors.

Anal Chim Acta. 2022-11-22

[4]
Combating small molecule environmental contaminants: detection and sequestration using functional nucleic acids.

Chem Sci. 2022-6-6

[5]
Design of a High-Sensitivity Dimeric G-Quadruplex/Hemin DNAzyme Biosensor for Norovirus Detection.

Molecules. 2021-12-3

[6]
Advances and Future Perspective on Detection Technology of Human Norovirus.

Pathogens. 2021-10-26

[7]
HRPZyme Assisted Recognition of SARS-CoV-2 infection by Optical Measurement (HARIOM).

Biosens Bioelectron. 2021-9-1

[8]
Toward a Rational Approach to Design Split G-Quadruplex Probes.

ACS Chem Biol. 2019-10-22

[9]
Label-Free Pathogen Detection by a Deoxyribozyme Cascade with Visual Signal Readout.

Sens Actuators B Chem. 2019-3-1

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