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诺如病毒II基因组在污水和牡蛎中的焦磷酸测序分析:首次在牡蛎中检测到2014年川崎株GII.17

Pyrosequencing Analysis of Norovirus Genogroup II Distribution in Sewage and Oysters: First Detection of GII.17 Kawasaki 2014 in Oysters.

作者信息

Pu Jian, Kazama Shinobu, Miura Takayuki, Azraini Nabila Dhyan, Konta Yoshimitsu, Ito Hiroaki, Ueki You, Cahyaningrum Ermaya Eka, Omura Tatsuo, Watanabe Toru

机构信息

Department of Food, Life and Environmental Sciences, Yamagata University, 1-23 Wakaba-machi, Tsuruoka, Yamagata, 997-8555, Japan.

New Industry Creation Hatchery Center, Tohoku University, 6-6-04 Aoba, Aramaki, Aoba-ku, Sendai, Miyagi, 980-8579, Japan.

出版信息

Food Environ Virol. 2016 Dec;8(4):310-312. doi: 10.1007/s12560-016-9261-5. Epub 2016 Sep 19.

Abstract

Norovirus GII.3, GII.4, and GII.17 were detected using pyrosequencing in sewage and oysters in January and February 2015, in Japan. The strains in sewage and oyster samples were genetically identical or similar, predominant strains belonging to GII.17 Kawasaki 2014 lineage. This is the first report of GII.17 Kawasaki 2014 in oysters.

摘要

2015年1月和2月,在日本通过焦磷酸测序法在污水和牡蛎中检测到了诺如病毒GII.3、GII.4和GII.17。污水和牡蛎样本中的毒株在基因上相同或相似,主要毒株属于GII.17川崎2014谱系。这是关于GII.17川崎2014在牡蛎中的首次报告。

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