Cheng Ling, Yu Hongsong, Jiang Yan, He Juan, Pu Sisi, Li Xin, Zhang Li
The First Affiliated Hospital of Chongqing Medical University, Chongqing Key Laboratory of Ophthalmology and Chongqing Eye Institute, Chongqing, P. R. China.
Department of Ophthalmology, Yongchuan Hospital, Chongqing Medical University, Chongqing, P. R. China.
Oncotarget. 2017 Dec 19;9(2):2295-2303. doi: 10.18632/oncotarget.23408. eCollection 2018 Jan 5.
Usher syndrome (USH) is an autosomal recessive disease characterized by deafness and retinitis pigmentosa. In view of the high phenotypic and genetic heterogeneity in USH, performing genetic screening with traditional methods is impractical. In the present study, we carried out targeted next-generation sequencing (NGS) to uncover the underlying gene in an USH family (2 USH patients and 15 unaffected relatives). One hundred and thirty-five genes associated with inherited retinal degeneration were selected for deep exome sequencing. Subsequently, variant analysis, Sanger validation and segregation tests were utilized to identify the disease-causing mutations in this family. All affected individuals had a classic USH type I (USH1) phenotype which included deafness, vestibular dysfunction and retinitis pigmentosa. Targeted NGS and Sanger sequencing validation suggested that USH1 patients carried an unreported splice site mutation, c.5168+1G>A, as a compound heterozygous mutation with c.6070C>T (p.R2024X) in the MYO7A gene. A functional study revealed decreased expression of the gene in the individuals carrying heterozygous mutations. In conclusion, targeted next-generation sequencing provided a comprehensive and efficient diagnosis for USH1. This study revealed the genetic defects in the MYO7A gene and expanded the spectrum of clinical phenotypes associated with USH1 mutations.
乌舍尔综合征(USH)是一种常染色体隐性疾病,其特征为耳聋和色素性视网膜炎。鉴于USH存在高度的表型和基因异质性,采用传统方法进行基因筛查并不实际。在本研究中,我们开展了靶向新一代测序(NGS),以揭示一个USH家系(2名USH患者和15名未受影响的亲属)中的潜在致病基因。选择了135个与遗传性视网膜变性相关的基因进行深度外显子组测序。随后,利用变异分析、桑格验证和分离测试来鉴定该家系中的致病突变。所有受影响个体均具有典型的USH1型表型,包括耳聋、前庭功能障碍和色素性视网膜炎。靶向NGS和桑格测序验证表明,USH1患者携带一个未报道的剪接位点突变c.5168+1G>A,作为与MYO7A基因中c.6070C>T(p.R2024X)的复合杂合突变。功能研究显示,携带杂合突变的个体中该基因的表达降低。总之,靶向新一代测序为USH1提供了全面且高效的诊断。本研究揭示了MYO7A基因中的遗传缺陷,并扩展了与USH1突变相关的临床表型谱。