State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology , Shanghai Jiao Tong University , Shanghai 200240 , China.
National Key Laboratory of Biochemical Engineering, Institute of Process Engineering , Chinese Academy of Sciences , Beijing , 100190 , People's Republic of China.
ACS Chem Biol. 2018 Apr 20;13(4):871-875. doi: 10.1021/acschembio.7b00982. Epub 2018 Feb 15.
An enoylreductase (ER) domain of a polyketide synthase module recruiting a methylmalonate extender unit sets the C2 methyl branch to either the S or R configuration during processing of a polyketide intermediate carried by an acyl carrier protein (ACP) domain. In the present study, pantetheine- and ACP-bound trans-2-methylcrotonyl substrate surrogates were used to scrutinize the stereospecificity of the ER domains. The pantetheine-bound thioester was reduced to mixtures of both 2 R and 2 S products, whereas the expected 2 S epimer was almost exclusively generated when the cognate ACP-bound substrate surrogate was utilized. The analogous incubation of an ER with the substrate surrogate carried by a noncognate ACP significantly increased the generation of the unexpected 2 R epimer, highlighting the dependence of stereospecificity on proper protein-protein interactions between ER and ACP domains. The ER mutant assays revealed the involvement of the conserved tyrosine and lysine in stereocontrol. Taken together, these results expand the current understanding of the ER stereochemistry and help in the engineering of modular PKSs.
烯酰还原酶(ER)结构域可招募丙二酰基辅酶 A 延长单元,在酰基辅酶 A(ACP)结构域携带的聚酮中间产物的加工过程中,将 C2 甲基支链设置为 S 或 R 构型。在本研究中,使用 pantetheine 和 ACP 结合的反式-2-甲基巴豆酰基底物类似物来仔细研究 ER 结构域的立体特异性。 pantetheine 结合的硫酯被还原为 2R 和 2S 产物的混合物,而当使用同源 ACP 结合的底物类似物时,几乎仅生成预期的 2S 差向异构体。类似地,用非同源 ACP 携带的底物类似物孵育 ER 显著增加了意外的 2R 差向异构体的生成,突出了立体特异性对 ER 和 ACP 结构域之间正确蛋白质-蛋白质相互作用的依赖性。 ER 突变体测定揭示了保守的酪氨酸和赖氨酸在立体控制中的参与。综上所述,这些结果扩展了 ER 立体化学的现有认识,并有助于模块化 PKS 的工程设计。