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阿尔茨海默病小鼠模型中阿尔茨海默病相关环状RNA差异表达谱的综合分析

Comprehensive analysis of differentially expressed profiles of Alzheimer's disease associated circular RNAs in an Alzheimer's disease mouse model.

作者信息

Huang Jin-Lan, Qin Mei-Chun, Zhou Yan, Xu Zhe-Hao, Yang Si-Man, Zhang Fan, Zhong Jing, Liang Ming-Kun, Chen Ben, Zhang Wen-Yan, Wu Deng-Pan, Zhong Zhen-Guo

机构信息

Department of Pharmacology, Pharmacy School, Xuzhou Medical University, Xuzhou, Jiangsu 221004, China.

Jiangsu Key Laboratory of New Drug Research and Clinical Pharmacy, Pharmacy School, Xuzhou Medical University, Xuzhou, Jiangsu 221004, China.

出版信息

Aging (Albany NY). 2018 Feb 15;10(2):253-265. doi: 10.18632/aging.101387.

DOI:10.18632/aging.101387
PMID:29448241
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5842852/
Abstract

Circular RNAs (circRNAs), a novel kind of non-coding RNA, have received increasing attention for their involvement in pathogenesis of Alzheimer's disease (AD); however, few studies have reported in the characterization and function of AD associated circRNAs. Here the expression profiles of circRNAs in 5- and 10-month-old SAMP8 mice were identified using circRNA microarray and found that 85 dysregulated circRNAs were observed in 10-month-old SAMP8 versus control mice and 231 circRNAs exhibited differential expression in 10-month-old SAMP8 versus 5-month-old SAMP8. One most significantly dysregulated circRNA, mmu_circRNA_017963, was select for Gene Oncology (GO) and pathway analysis. The results showed that mmu_circRNA_017963 was strongly related with autophagosome assembly, exocytosis, apoptotic process, transport and RNA splicing and highly associated with synaptic vesicle cycle, spliceosome, glycosaminoglycan and SNARE interactions in vesicular transport pathways. Collectively, this study was the first to describe circRNAs expression in different ages of SAMP8 and will contribute to the understanding of the regulatory roles of circRNAs in AD pathogenesis and provide a valuable resource for the diagnosis and therapy of AD.

摘要

环状RNA(circRNAs)是一种新型的非编码RNA,因其参与阿尔茨海默病(AD)的发病机制而受到越来越多的关注;然而,关于AD相关circRNAs的特征和功能的研究报道较少。在此,我们使用circRNA微阵列鉴定了5月龄和10月龄SAMP8小鼠中circRNAs的表达谱,发现在10月龄SAMP8小鼠与对照小鼠中观察到85种失调的circRNAs,并且在10月龄SAMP8小鼠与5月龄SAMP8小鼠中有231种circRNAs表现出差异表达。选择一种失调最显著的circRNA,即mmu_circRNA_017963进行基因本体论(GO)和通路分析。结果表明,mmu_circRNA_017963与自噬体组装、胞吐作用、凋亡过程、转运和RNA剪接密切相关,并且与囊泡运输途径中的突触小泡循环、剪接体、糖胺聚糖和SNARE相互作用高度相关。总的来说,本研究首次描述了不同年龄SAMP8小鼠中circRNAs的表达情况,将有助于理解circRNAs在AD发病机制中的调控作用,并为AD的诊断和治疗提供有价值的资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/127cdd4571c2/aging-10-101387-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/018119d09875/aging-10-101387-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/d135aadd1cf4/aging-10-101387-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/d8c60983de68/aging-10-101387-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/12252b080a26/aging-10-101387-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/40917389f3d6/aging-10-101387-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/127cdd4571c2/aging-10-101387-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/018119d09875/aging-10-101387-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/d135aadd1cf4/aging-10-101387-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/d8c60983de68/aging-10-101387-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/12252b080a26/aging-10-101387-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/40917389f3d6/aging-10-101387-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f70/5842852/127cdd4571c2/aging-10-101387-g006.jpg

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