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本文引用的文献

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Genomic and Genetic Diversity within the Pseudomonas fluorescens Complex.荧光假单胞菌复合体中的基因组和遗传多样性。
PLoS One. 2016 Feb 25;11(2):e0150183. doi: 10.1371/journal.pone.0150183. eCollection 2016.
2
Draft Genome Sequences of Seven Pseudomonas fluorescens Subclade III Strains Isolated from Cystic Fibrosis Patients.从囊性纤维化患者中分离出的七株荧光假单胞菌亚群III菌株的基因组序列草图
Genome Announc. 2015 Jan 29;3(1):e01285-14. doi: 10.1128/genomeA.01285-14.
3
Microbiology, genomics, and clinical significance of the Pseudomonas fluorescens species complex, an unappreciated colonizer of humans.荧光假单胞菌物种复合体的微生物学、基因组学及临床意义，一种未被充分认识的人类定植菌。
Clin Microbiol Rev. 2014 Oct;27(4):927-48. doi: 10.1128/CMR.00044-14.
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MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7：性能和易用性的改进。
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Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions.植物相关假单胞菌的比较基因组学：多营养相互作用相关性状多样性和遗传的研究。
PLoS Genet. 2012 Jul;8(7):e1002784. doi: 10.1371/journal.pgen.1002784. Epub 2012 Jul 5.
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DNA sequence-based analysis of the Pseudomonas species.基于 DNA 序列的假单胞菌属分析。
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Reordering contigs of draft genomes using the Mauve aligner.使用 Mauve 比对工具重新排列草图基因组的顺序。
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MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.MAFFT：一种基于快速傅里叶变换的快速多序列比对新方法。
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Phylogenetic analysis of Aquaspirillum magnetotacticum using polymerase chain reaction-amplified 16S rRNA-specific DNA.利用聚合酶链反应扩增的16S rRNA特异性DNA对趋磁水生螺菌进行系统发育分析。
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从人类肺部分离出的12株菌株的基因组序列

Genome Sequences of 12 Strains Isolated from the Lungs of Humans.

作者信息

Scales Brittan S, Erb-Downward John R, Falkowski Nicole R, LiPuma John J, Huffnagle Gary B

机构信息

Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan, USA.

Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, USA.

出版信息

Genome Announc. 2018 Feb 15;6(7):e01461-17. doi: 10.1128/genomeA.01461-17.

DOI:10.1128/genomeA.01461-17
PMID:29449399
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5814480/
Abstract

We report here the first complete genome sequence of a human isolate, strain AU1044, and the draft genomes of 11 other clinical strains, isolated from the lungs of cystic fibrosis patients. The genome of strain AU1044 is 4.81 Mb and encodes seven 16S rRNAs.

摘要

我们在此报告了从囊性纤维化患者肺部分离出的人类菌株AU1044的首个完整基因组序列，以及其他11个临床菌株的基因组草图。菌株AU1044的基因组为4.81 Mb，编码7个16S rRNA。