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一个潜在的用于预测接受他莫昔芬治疗的 ER 阳性乳腺癌患者复发的长非编码 RNA 预后标志物。

A Potential Prognostic Long Noncoding RNA Signature to Predict Recurrence among ER-positive Breast Cancer Patients Treated with Tamoxifen.

机构信息

Department of the Endocrine and Breast Surgery, The First Affiliated Hospital of Chongqing Medical University, Chongqing Medical University, Chongqing, 400016, China.

Department of Gastrointestinal Surgery, The First Affiliated Hospital of Chongqing Medical University, Chongqing Medical University, Chongqing, 400016, China.

出版信息

Sci Rep. 2018 Feb 16;8(1):3179. doi: 10.1038/s41598-018-21581-w.

Abstract

Limited predictable long noncoding RNA (lncRNA) signature was reported in tamoxifen resistance among estrogen receptor (ER)-positive breast cancer (BC) patients. The aim of this study was to identify and assess prognostic lncRNA signature to predict recurrence among ER-positive BC patients treated with tamoxifen. Cohorts from Gene Expression Omnibus (GEO) (n = 298) and The Cancer Genome Atlas (TCGA) (n = 160) were defined as training and validation cohort, respectively. BC relapse associated lnRNAs was identify within training cohort, and the predictable value of recurrence was assessed in both cohorts. A total of 11lncRNAs were recognized to be associated with relapse free survival (RFS) of ER-positive BC patients receiving tamoxifen, who were divided into low-risk and high-risk group on basis of relapse risk scores (RRS). Multivariate cox regression analyses revealed that the RRS is an independent prognostic biomarker in the prediction of ER-positive BC patients' survival. GSEA indicated that high-risk group was associated with several signaling pathways in processing of BC recurrence and metastasis such as PI3K-Akt and Wnt signaling. Our 11-lncRNA based classifier is a reliable prognostic and predictive tool for disease relapse in BC patients receiving tamoxifen.

摘要

在雌激素受体(ER)阳性乳腺癌(BC)患者中,他莫昔芬耐药的长链非编码 RNA(lncRNA)的预测特征有限。本研究的目的是鉴定和评估预测 ER 阳性 BC 患者接受他莫昔芬治疗后复发的预后 lncRNA 特征。来自基因表达综合数据库(GEO)(n=298)和癌症基因组图谱(TCGA)(n=160)的队列分别被定义为训练和验证队列。在训练队列中确定了与 BC 复发相关的 lncRNAs,并在两个队列中评估了复发的可预测性。共发现 11 个 lncRNA 与接受他莫昔芬治疗的 ER 阳性 BC 患者的无复发生存(RFS)相关,这些患者根据复发风险评分(RRS)分为低风险组和高风险组。多变量 COX 回归分析表明,RRS 是预测 ER 阳性 BC 患者生存的独立预后生物标志物。GSEA 表明,高风险组与 BC 复发和转移过程中的几个信号通路有关,如 PI3K-Akt 和 Wnt 信号通路。我们基于 11 个 lncRNA 的分类器是预测接受他莫昔芬治疗的 BC 患者疾病复发的可靠预后和预测工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51d1/5816619/bf5bb1a4f302/41598_2018_21581_Fig1_HTML.jpg

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