Departamento de Microbiología y Parasitología, Edificio CIBUS-Facultad de Biología and Instituto de Investigación y Análisis Alimentarios, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain.
Appl Microbiol Biotechnol. 2018 Mar;102(6):2779-2789. doi: 10.1007/s00253-018-8825-8. Epub 2018 Feb 16.
In the present study, the potential of serological methods, the repetitive extragenic palindromic PCR (REP-PCR) and the enterobacterial repetitive intergenic consensus sequence PCR (ERIC-PCR) for the typing of the species Tenacibaculum maritimum, Tenacibaculum soleae and Tenacibaculum discolor was evaluated. Moreover, molecular and proteomic techniques were used to assess variability among strains belonging to different serotypes, as well as isolated from different host species and geographical areas. Slide agglutination and dot-blot assays demonstrated the lack of immunological relationships among Tenacibaculum species analyzed. The serotype O1 was predominant within T. maritimum isolates regardless of the fish species or geographical area. Two serotypes were distinguished within T. soleae isolates and at least one within T. discolor strains. Species- and strain-specific profiles were obtained from the analysis of T. maritimum, T. soleae and T. discolor by REP-PCR and ERIC-PCR, demonstrating their potential as diagnostic tools. The genotyping analysis using both techniques showed genetic variability among the strains of each fish pathogenic Tenacibaculum species analysed. However, Tenacibaculum strains isolated from different host species or geographical areas or belonging to different serotypes produced REP and ERIC profiles with high similarity. Analysis by MALDI-TOF-MS of the T. maritimum strains could not detect any serotype-identifying biomarkers. Serotype-specific mass peaks were found for the serotypes O1 and O2 of T. soleae and for the serotype O1 of T. discolor. However, no relationships between the proteomic profiles and the source of isolation of the strains were obtained for any of the Tenacibaculum species analysed in this study.
在本研究中,评估了血清学方法、重复外回文 PCR(REP-PCR)和肠细菌重复间基因一致性 PCR(ERIC-PCR)在鉴定鱼类病原菌海洋分枝杆菌、海生分枝杆菌和浅黄分枝杆菌的潜在应用。此外,还使用分子和蛋白质组学技术评估了不同血清型、不同宿主物种和地理区域分离株之间的变异性。玻片凝集和斑点印迹分析表明,所分析的海洋分枝杆菌种之间不存在免疫关系。无论鱼类物种或地理区域如何,海洋分枝杆菌分离株中 O1 血清型均占优势。在海生分枝杆菌分离株中区分出两种血清型,在浅黄分枝杆菌菌株中至少区分出一种血清型。通过 REP-PCR 和 ERIC-PCR 对海洋分枝杆菌、海生分枝杆菌和浅黄分枝杆菌进行分析,获得了种属和菌株特异性图谱,证明它们具有作为诊断工具的潜力。两种技术的基因分型分析表明,所分析的每种鱼类致病性海洋分枝杆菌种的菌株之间存在遗传变异性。然而,来自不同宿主物种或地理区域或属于不同血清型的海洋分枝杆菌菌株产生的 REP 和 ERIC 图谱具有高度相似性。MALDI-TOF-MS 分析海洋分枝杆菌菌株时,无法检测到任何血清型鉴定生物标志物。海生分枝杆菌的 O1 和 O2 血清型以及浅黄分枝杆菌的 O1 血清型发现了血清型特异性的质荷比峰。然而,在所分析的任何海洋分枝杆菌种中,均未获得菌株分离源与蛋白质组图谱之间的关系。