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用于快速区分鱼类致病性海杆菌属菌种的基质辅助激光解吸电离飞行时间质谱分析

MALDI-TOF mass spectrometry for rapid differentiation of Tenacibaculum species pathogenic for fish.

作者信息

Fernández-Álvarez Clara, Torres-Corral Yolanda, Saltos-Rosero Nancy, Santos Ysabel

机构信息

Departamento de Microbiología y Parasitología, Edificio CIBUS Facultad de Biología and Instituto de Investigación y Análisis Alimentario, Universidad de Santiago de Compostela, 15782, Santiago de Compostela, Spain.

出版信息

Appl Microbiol Biotechnol. 2017 Jul;101(13):5377-5390. doi: 10.1007/s00253-017-8324-3. Epub 2017 May 31.

Abstract

Tenacibaculosis is a fish disease that limits the culture of a variety of marine fish species of commercial value in the world. The genus Tenacibaculum includes several species, and their discrimination is of clinical interest in order to improve the management of an outbreak of the disease. In this study, a novel proteomic approach based on matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) analysis was evaluated for the identification and differentiation of Tenacibaculum species. The peak mass lists derived from MALDI-TOF-MS analysis were examined for the detection of potential biomarkers, similarity and cluster analysis and principal component analysis (PCA). Culture media used for bacterial growth did not affect the mass fingerprints. Eight genus-specific peaks were found in all the Tenacibaculum species analysed. Moreover, at least one species-specific peak was found in the species Tenacibaculum maritimum, Tenacibaculum soleae, Tenacibaculum dicentrarchi, Tenacibaculum litoreum and Tenacibaculum ovolyticum. These peaks could serve as biomarkers for the rapid identification of these bacterial fish pathogens. The cluster and PCA clearly separated the species T. maritimum, T. soleae, T. dicentrarchi and T. ovolyticum in different clusters. However, species of Tenacibaculum discolor and Tenacibaculum gallaicum were difficult to distinguish based on their protein fingerprints. To our knowledge, this is the first study that deals with the characterization and determination of biomarkers of Tenacibaculum species by MALDI-TOF mass spectrometry. This approach proved to be an effective and reliable technique for the discrimination of the Tenacibaculum species; therefore, it could be integrated as a routine diagnostic tool in microbiological laboratories.

摘要

溃疡病是一种鱼类疾病,它限制了世界上多种具有商业价值的海洋鱼类的养殖。纤维黏细菌属包括几个物种,为了更好地管理疾病爆发,对它们进行鉴别具有临床意义。在本研究中,评估了一种基于基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF-MS)分析的新型蛋白质组学方法,用于纤维黏细菌属物种的鉴定和区分。对MALDI-TOF-MS分析得出的质荷比列表进行了检测潜在生物标志物、相似性和聚类分析以及主成分分析(PCA)。用于细菌生长的培养基不影响质谱指纹。在所有分析的纤维黏细菌属物种中发现了8个属特异性峰。此外,在海生纤维黏细菌、鳎纤维黏细菌、石斑鱼纤维黏细菌、沿岸纤维黏细菌和溶卵纤维黏细菌中至少发现了一个物种特异性峰。这些峰可作为快速鉴定这些鱼类细菌性病原体的生物标志物。聚类分析和主成分分析将海生纤维黏细菌、鳎纤维黏细菌、石斑鱼纤维黏细菌和溶卵纤维黏细菌明显分为不同的聚类。然而,基于蛋白质指纹图谱,难以区分变色纤维黏细菌和加氏纤维黏细菌。据我们所知,这是第一项通过MALDI-TOF质谱对纤维黏细菌属物种进行表征和生物标志物测定的研究。该方法被证明是一种有效且可靠的区分纤维黏细菌属物种的技术;因此,它可以作为微生物实验室的常规诊断工具。

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