Choi Seon, Kang Joo Won, Yoon Jung-Hoon, Seong Chi Nam
Department of Biology, College of Life Science and Natural Resources, Sunchon National University, Suncheon 57922, Republic of Korea.
Department of Food Science and Biotechnology, Sungkyunkwan University, Suwon 16419, Republic of Korea.
Int J Syst Evol Microbiol. 2018 Mar;68(3):899-904. doi: 10.1099/ijsem.0.002607. Epub 2018 Feb 1.
A non-motile, proteorhodopsin-containing, yellow and rod-shaped bacterial strain, designated ZODW10, was isolated from the seaweed Zostera marina collected from the West Sea, Republic of Korea. Cells were Gram-stain-negative, aerobic and non-motile. The isolate required sea salts for growth. A carotenoid pigment was produced. A phylogenetic tree based on 16S rRNA gene sequences showed that strain ZODW10 forms an evolutionary lineage within the radiation enclosing members of the genus Dokdonia with Dokdoniadiaphoros CIP 108745 (96.7 % sequence similarity) as its nearest neighbour. The major fatty acids were iso-C15:0, iso-C17 : 0 3-OH and iso-C15 : 1 G. Strain ZODW10 contained menaquinone 6 (MK-6) and phosphatidylethanolamine, an unidentified aminolipid and an unidentified polar lipid as the only isoprenoid quinone and the major polar lipids, respectively. The DNA G+C content of strain ZODW10 was 36 mol%. On the basis of the present polyphasic characterization, it is suggested that the isolate represents a novel species of the genus Dokdonia, for which the name Dokdonia flava sp. nov. (type strain, ZODW10=KCTC 52953=JCM 32293) is proposed.
从韩国西海采集的海草大叶藻中分离出一株不运动、含视紫红质、黄色杆状的细菌菌株,命名为ZODW10。细胞革兰氏染色阴性,好氧且不运动。该分离株生长需要海盐。能产生类胡萝卜素色素。基于16S rRNA基因序列构建的系统发育树表明,菌株ZODW10在包含多克菌属成员的辐射分支内形成一个进化谱系,其最接近的亲缘种是多克菌属透照菌CIP 108745(序列相似性为96.7%)。主要脂肪酸为异C15:0、异C17:0 3-OH和异C15:1 G。菌株ZODW10含有甲基萘醌6(MK-6)和磷脂酰乙醇胺,分别作为唯一的类异戊二烯醌和主要极性脂质,还含有一种未鉴定的氨基脂质和一种未鉴定的极性脂质。菌株ZODW10的DNA G+C含量为36mol%。基于目前的多相分类特征,建议该分离株代表多克菌属的一个新物种,为此提出名称黄多克菌(Dokdonia flava sp. nov.)(模式菌株,ZODW10=KCTC 52953=JCM 32293)。