Viljoen L M, Hemerik L, Molenaar J
Department of Mathematics and Applied Mathematics, North West University, Potchefstroom, North West, South Africa.
Biometris, Department of Mathematical and Statistical Methods, Wageningen University, Wageningen, The Netherlands.
Acta Biotheor. 2018 Mar;66(1):1-16. doi: 10.1007/s10441-018-9315-1. Epub 2018 Feb 19.
The basic reproduction ratio, R, is a fundamental concept in epidemiology. It is defined as the total number of secondary infections brought on by a single primary infection, in a totally susceptible population. The value of R indicates whether a starting epidemic reaches a considerable part of the population and causes a lot of damage, or whether it remains restricted to a relatively small number of individuals. To calculate R one has to evaluate an integral that ranges over the duration of the infection of the host. This duration is, of course, limited by remaining host longevity. So, R depends on remaining host longevity and in this paper we show that for long-lived hosts this aspect may not be ignored for long-lasting infections. We investigate in particular how this epidemiological measure of pathogen fitness depends on host longevity. For our analyses we adopt and combine a generic within- and between-host model from the literature. To find the optimal strategy for a pathogen from an evolutionary point of view, we focus on the indicator [Formula: see text], i.e., the optimum of R as a function of its replication and mutation rates. These are the within-host parameters that the pathogen has at its disposal to optimize its strategy. We show that [Formula: see text] is highly influenced by remaining host longevity in combination with the contact rate between hosts in a susceptible population. In addition, these two parameters determine whether a killer-like or a milker-like strategy is optimal for a given pathogen. In the killer-like strategy the pathogen has a high rate of reproduction within the host in a short time span causing a relatively short disease, whereas in the milker-like strategy the pathogen multiplies relatively slowly, producing a continuous small amount of offspring over time with a small effect on host health. The present research allows for the determination of a bifurcation line in the plane of host longevity versus contact rate that forms the boundary between the milker-like and killer-like regions. This plot shows that for short remaining host longevities the killer-like strategy is optimal, whereas for very long remaining host longevities the milker-like strategy is advantageous. For in-between values of host longevity, the contact rate determines which of both strategies is optimal.
基本再生数R是流行病学中的一个基本概念。它被定义为在完全易感人群中,由单个原发感染引发的二代感染总数。R的值表明起始疫情是会波及相当一部分人群并造成大量损害,还是会局限于相对少数个体。为了计算R,必须对宿主感染持续时间范围内的一个积分进行评估。当然,这个持续时间受到宿主剩余寿命的限制。所以,R取决于宿主剩余寿命,并且在本文中我们表明,对于长寿宿主而言,在持久感染的情况下,这一方面不可忽视。我们特别研究了这种病原体适应性的流行病学指标如何依赖于宿主寿命。为了进行分析,我们采用并结合了文献中的一个通用的宿主内和宿主间模型。从进化的角度找到病原体的最优策略时,我们关注指标[公式:见原文],即R作为其复制和突变率函数的最优值。这些是病原体可用来优化其策略的宿主内参数。我们表明,[公式:见原文]受到宿主剩余寿命以及易感人群中宿主间接触率的高度影响。此外,这两个参数决定了对于给定病原体而言,类杀手策略还是类挤奶工策略是最优的。在类杀手策略中,病原体在短时间内宿主内繁殖率高,导致疾病相对较短,而在类挤奶工策略中,病原体繁殖相对缓慢,随着时间推移持续产生少量后代,对宿主健康影响较小。本研究能够确定宿主寿命与接触率平面中的一条分岔线,该分岔线构成了类挤奶工区域和类杀手区域之间的边界。此图表明,对于较短的宿主剩余寿命,类杀手策略是最优的,而对于非常长的宿主剩余寿命,类挤奶工策略更具优势。对于宿主寿命的中间值,接触率决定了两种策略中哪种是最优的。