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印度白斑综合征病毒全基因组序列的首次报告。

First Report of a Complete Genome Sequence of White spot syndrome virus from India.

作者信息

Vinaya Kumar K, Shekhar M S, Otta S K, Karthic K, Ashok Kumar J, Gopikrishna G, Vijayan K K

机构信息

Nutrition Genetics and Biotechnology Division, ICAR-Central Institute of Brackishwater Aquaculture, Chennai, Tamil Nadu, India.

Nutrition Genetics and Biotechnology Division, ICAR-Central Institute of Brackishwater Aquaculture, Chennai, Tamil Nadu, India

出版信息

Genome Announc. 2018 Feb 22;6(8):e00055-18. doi: 10.1128/genomeA.00055-18.

DOI:10.1128/genomeA.00055-18
PMID:29472330
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5824010/
Abstract

is a major pathogen of shrimp, causing economic loss to the aquaculture industry. For the first time, a complete genome of an Indian isolate of this virus has been deciphered using Illumina and Nanopore sequencing technologies. The genome has 280,591 bp with 442 predicted coding genes.

摘要

是虾类的主要病原体,给水产养殖业造成经济损失。首次利用Illumina和Nanopore测序技术解析了该病毒印度分离株的完整基因组。该基因组有280,591 bp,包含442个预测的编码基因。

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本文引用的文献

1
A VP24-truncated isolate of white spot syndrome virus is inefficient in per os infection.VP24 截短的白斑综合征病毒分离株经口感染效率低。
Vet Res. 2017 Dec 11;48(1):87. doi: 10.1186/s13567-017-0492-8.
2
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.