• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

蛋白质相互作用的模糊性——历史视角。

Fuzziness in Protein Interactions-A Historical Perspective.

机构信息

MTA-DE Laboratory of Protein Dynamics, Department of Biochemistry and Molecular Biology, University of Debrecen, Debrecen, Hungary.

出版信息

J Mol Biol. 2018 Aug 3;430(16):2278-2287. doi: 10.1016/j.jmb.2018.02.015. Epub 2018 Feb 23.

DOI:10.1016/j.jmb.2018.02.015
PMID:29477337
Abstract

The proposal that coupled folding to binding is not an obligatory mechanism for intrinsically disordered (ID) proteins was put forward 10 years ago. The notion of fuzziness implies that conformational heterogeneity can be maintained upon interactions of ID proteins, which has a functional impact either on regulated assembly or activity of the corresponding complexes. Here I review how the concept has evolved in the past decade, via increasing experimental data providing insights into the mechanisms, pathways and regulatory modes. The effects of structural diversity and transient contacts on protein assemblies have been collected and systematically analyzed (Fuzzy Complexes Database, http://protdyn-database.org). Fuzziness has also been exploited as a framework to decipher molecular organization of higher-order protein structures. Quantification of conformational heterogeneity opens exciting future perspectives for drug discovery from small molecule-ID protein interactions to supramolecular assemblies.

摘要

10 年前就有人提出,折叠与结合偶联并不是无序蛋白(ID)的必需机制。模糊性概念意味着 ID 蛋白相互作用时可以维持构象异质性,这对相应复合物的调节组装或活性有功能影响。本文通过越来越多的实验数据深入了解机制、途径和调控模式,回顾了该概念在过去十年中的发展。已收集并系统分析了结构多样性和瞬时接触对蛋白质组装的影响(模糊复合物数据库,http://protdyn-database.org)。模糊性也被用作框架来解析高级别蛋白质结构的分子组织。构象异质性的定量为从小分子-ID 蛋白相互作用到超分子组装的药物发现开辟了令人兴奋的未来前景。

相似文献

1
Fuzziness in Protein Interactions-A Historical Perspective.蛋白质相互作用的模糊性——历史视角。
J Mol Biol. 2018 Aug 3;430(16):2278-2287. doi: 10.1016/j.jmb.2018.02.015. Epub 2018 Feb 23.
2
Sequence-Based Prediction of Fuzzy Protein Interactions.基于序列的模糊蛋白质相互作用预测。
J Mol Biol. 2020 Mar 27;432(7):2289-2303. doi: 10.1016/j.jmb.2020.02.017. Epub 2020 Feb 27.
3
Fuzzy complexes: Specific binding without complete folding.模糊复合体:无需完全折叠即可实现特异性结合。
FEBS Lett. 2015 Sep 14;589(19 Pt A):2533-42. doi: 10.1016/j.febslet.2015.07.022. Epub 2015 Jul 27.
4
Fuzziness enables context dependence of protein interactions.模糊性使得蛋白质相互作用具有上下文依赖性。
FEBS Lett. 2017 Sep;591(17):2682-2695. doi: 10.1002/1873-3468.12762. Epub 2017 Aug 20.
5
Extreme Fuzziness: Direct Interactions between Two IDPs.极端模糊性:两个 IDP 之间的直接相互作用。
Biomolecules. 2019 Feb 26;9(3):81. doi: 10.3390/biom9030081.
6
The Thermodynamic Basis of the Fuzzy Interaction of an Intrinsically Disordered Protein.无序蛋白质的模糊相互作用的热力学基础。
Angew Chem Int Ed Engl. 2017 Nov 13;56(46):14494-14497. doi: 10.1002/anie.201707853. Epub 2017 Oct 10.
7
Fuzzy protein theory for disordered proteins.无序蛋白质的模糊蛋白质理论。
Biochem Soc Trans. 2020 Dec 18;48(6):2557-2564. doi: 10.1042/BST20200239.
8
FuzDB: database of fuzzy complexes, a tool to develop stochastic structure-function relationships for protein complexes and higher-order assemblies.FuzDB:模糊复合体数据库,一种用于建立蛋白质复合体和高阶组装体随机结构-功能关系的工具。
Nucleic Acids Res. 2017 Jan 4;45(D1):D228-D235. doi: 10.1093/nar/gkw1019. Epub 2016 Oct 28.
9
The multifaceted roles of intrinsic disorder in protein complexes.内在无序在蛋白质复合物中的多方面作用。
FEBS Lett. 2015 Sep 14;589(19 Pt A):2498-506. doi: 10.1016/j.febslet.2015.06.004. Epub 2015 Jun 11.
10
Theoretical perspectives on nonnative interactions and intrinsic disorder in protein folding and binding.蛋白质折叠与结合中非天然相互作用及内在无序的理论观点。
Curr Opin Struct Biol. 2015 Feb;30:32-42. doi: 10.1016/j.sbi.2014.12.002. Epub 2014 Dec 24.

引用本文的文献

1
Fuzziness in enzymatic catalysis.酶催化中的模糊性。
Curr Opin Struct Biol. 2025 Jun 27;93:103106. doi: 10.1016/j.sbi.2025.103106.
2
Evolution of a fuzzy ribonucleoprotein complex in viral assembly.病毒组装过程中模糊核糖核蛋白复合体的演变
bioRxiv. 2025 Apr 28:2025.04.26.650775. doi: 10.1101/2025.04.26.650775.
3
Frustration in physiology and molecular medicine.生理学与分子医学中的挫折感。
Mol Aspects Med. 2025 Jun;103:101362. doi: 10.1016/j.mam.2025.101362. Epub 2025 Apr 23.
4
Coarse-Grained Simulations of Phosphorylation Regulation of p53 Autoinhibition.p53自身抑制磷酸化调控的粗粒度模拟
Biochemistry. 2025 Apr 1;64(7):1636-1645. doi: 10.1021/acs.biochem.4c00668. Epub 2025 Mar 18.
5
Frustration In Physiology And Molecular Medicine.生理学与分子医学中的挫折
ArXiv. 2025 Feb 6:arXiv:2502.03851v1.
6
Transferable deep generative modeling of intrinsically disordered protein conformations.可转移的深度生成模型对固有无序蛋白质构象的建模。
PLoS Comput Biol. 2024 May 23;20(5):e1012144. doi: 10.1371/journal.pcbi.1012144. eCollection 2024 May.
7
Fuzzy recognition by the prokaryotic transcription factor HigA2 from Vibrio cholerae.霍乱弧菌原核转录因子 HigA2 的模糊识别。
Nat Commun. 2024 Apr 10;15(1):3105. doi: 10.1038/s41467-024-47296-3.
8
Transferable deep generative modeling of intrinsically disordered protein conformations.内在无序蛋白质构象的可转移深度生成建模
bioRxiv. 2024 Feb 8:2024.02.08.579522. doi: 10.1101/2024.02.08.579522.
9
Nucleosome conformation dictates the histone code.核小体构象决定组蛋白密码。
Elife. 2024 Feb 6;13:e78866. doi: 10.7554/eLife.78866.
10
Toward Accurate Simulation of Coupling between Protein Secondary Structure and Phase Separation.实现蛋白质二级结构与相分离之间耦合的精确模拟。
J Am Chem Soc. 2024 Jan 10;146(1):342-357. doi: 10.1021/jacs.3c09195. Epub 2023 Dec 19.