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从 Geobacter metallireducens 中提取的三血红素细胞色素 PpcA 的生化和功能见解。

Biochemical and functional insights on the triheme cytochrome PpcA from Geobacter metallireducens.

机构信息

UCIBIO-Requimte, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, Campus Caparica, 2829-516 Caparica, Portugal.

UCIBIO-Requimte, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, Campus Caparica, 2829-516 Caparica, Portugal.

出版信息

Arch Biochem Biophys. 2018 Apr 15;644:8-16. doi: 10.1016/j.abb.2018.02.017. Epub 2018 Feb 25.

Abstract

G. metallireducens bacterium has highly versatile respiratory pathways that provide the microorganism an enormous potential for many biotechnological applications. However, little is known about the structural and functional properties of its electron transfer components. In this work, the periplasmic cytochrome PpcA from G. metallireducens was studied in detail for the first time using complementary biophysical techniques, including UV-visible, CD and NMR spectroscopy. The results obtained showed that PpcA contains three low-spin c-type heme groups with His-His axial coordination, a feature also observed for its homologue in G. sulfurreducens. However, despite the high sequence homology between the two cytochromes, important structural and functional differences were observed. The comparative analysis of the backbone, side chain and heme substituents NMR signals revealed differences in the relative orientation of the hemes I and III. In addition, redox titrations followed by visible spectroscopy showed that the redox potential values for PpcA from G. metallireducens (-78 and -93 mV at pH 7 and 8, respectively) are considerably less negative. Overall, this study provides biochemical and biophysical data of a key cytochrome from G. metallireducens, paving the way to understand the extracellular electron transfer mechanisms in these bacteria.

摘要

产金属还原菌具有高度多样化的呼吸途径,这为该微生物在许多生物技术应用中提供了巨大的潜力。然而,人们对其电子转移成分的结构和功能特性知之甚少。在这项工作中,首次使用互补的生物物理技术详细研究了产金属还原菌的周质细胞色素 PpcA,包括紫外-可见、CD 和 NMR 光谱。所得结果表明,PpcA 含有三个低自旋 c 型血红素基团,具有 His-His 轴向配位,这在其同源物 G. sulfurreducens 中也观察到了。然而,尽管这两种细胞色素具有很高的序列同源性,但观察到了重要的结构和功能差异。对骨干、侧链和血红素取代基 NMR 信号的比较分析表明,血红素 I 和 III 的相对取向存在差异。此外,可见光谱的氧化还原滴定表明,产金属还原菌 PpcA 的氧化还原电位值(分别在 pH 7 和 8 时为-78 和-93 mV)要低得多。总的来说,这项研究提供了产金属还原菌关键细胞色素的生化和生物物理数据,为理解这些细菌的细胞外电子转移机制铺平了道路。

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