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提高褐纹东方蝽的 RNAi 效率:实时荧光定量 PCR 靶基因和内参基因的鉴定。

Improving RNAi in the Brown Marmorated Stink Bug: Identification of target genes and reference genes for RT-qPCR.

机构信息

Department of Entomology, University of Kentucky, Lexington, Kentucky, 40546, USA.

出版信息

Sci Rep. 2018 Feb 27;8(1):3720. doi: 10.1038/s41598-018-22035-z.

Abstract

The brown marmorated stink bug (BMSB) is native to Asia and recently invaded the USA. RNA interference (RNAi) is a gene silencing mechanism in which the introduction of double-stranded RNA (dsRNA) inhibits gene function by degrading target mRNA. In dsRNA stability assays, the dsRNases present in the hemolymph and salivary gland secretions of BMSB showed lower activity than those in the hemolymph of Heliothis virescens. We evaluated six housekeeping genes (18S rRNA, EF1-α, Actin, Ubiquitin, 60S RP and β-Tubulin) across dsRNA treatments (injection and feeding) in nymphs and adults of BMSB and identified 18S rRNA and 60S RP as the best genes to use as a reference in reverse-transcriptase quantitative PCR (RT-qPCR). Homologs of 13 genes that were shown to function as effective RNAi targets in other insects were identified and evaluated by injecting dsRNA targeting these homologs into BMSB adults. Five out of 13 dsRNAs tested caused more than 70% mortality by seven days after injection of dsRNA. Feeding dsRNA targeting five of these genes (IAP, ATPase, SNF7, GPCR, and PPI) to nymphs caused more than 70% mortality by three of the five dsRNAs tested. These data suggest that feeding dsRNA causes target gene knockdown and mortality in BMSB.

摘要

棕色大理石纹臭虫(BMSB)原产于亚洲,最近入侵了美国。RNA 干扰(RNAi)是一种基因沉默机制,其中双链 RNA(dsRNA)的引入通过降解靶 mRNA 来抑制基因功能。在 dsRNA 稳定性测定中,BMSB 血淋巴和唾液腺分泌物中存在的 dsRNases 的活性低于 Heliothis virescens 血淋巴中的 dsRNases。我们评估了六个管家基因(18S rRNA、EF1-α、肌动蛋白、泛素、60S RP 和β-微管蛋白)在 BMSB 若虫和成虫的 dsRNA 处理(注射和喂食)中的表现,并确定 18S rRNA 和 60S RP 是反转录定量 PCR(RT-qPCR)中作为参考的最佳基因。鉴定出 13 个在其他昆虫中被证明作为有效 RNAi 靶标的基因的同源物,并通过向 BMSB 成虫注射靶向这些同源物的 dsRNA 来评估这些同源物。在测试的 13 个 dsRNA 中,有 5 个 dsRNA 导致 7 天后的死亡率超过 70%。喂食靶向其中 5 个基因(IAP、ATPase、SNF7、GPCR 和 PPI)的 dsRNA 导致 5 个 dsRNA 中有 3 个导致若虫死亡率超过 70%。这些数据表明,喂食 dsRNA 会导致 BMSB 靶基因敲低和死亡。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a9b/5829169/7999d1691fc9/41598_2018_22035_Fig1_HTML.jpg

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