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Kelvin 效应在抗冻蛋白活性中的作用:分子动力学模拟研究。

Operation of Kelvin Effect in the Activities of an Antifreeze Protein: A Molecular Dynamics Simulation Study.

机构信息

Molecular Modeling Laboratory, Department of Chemistry , Indian Institute of Technology , Kharagpur 721302 , India.

出版信息

J Phys Chem B. 2018 Mar 29;122(12):3079-3087. doi: 10.1021/acs.jpcb.8b00846. Epub 2018 Mar 19.

Abstract

Ice growth and melting inhibition activities of antifreeze proteins (AFPs) are better explained by the adsorption-inhibition mechanism. Inhibition occurs as a result of the Kelvin effect induced by adsorbed protein molecules onto the surface of seed ice crystal. However, the Kelvin effect has not been explored by the state-of-the-art experimental techniques. In this work, atomistic molecular dynamics simulations have been carried out with Tenebrio molitor antifreeze protein ( TmAFP) placed at ice-water interface to probe the Kelvin effect in the mechanism of AFPs. Simulations show that, below equilibrium melting temperature, ice growth is inhibited through the convex ice-water interface formation toward the water phase and, above equilibrium melting temperature, ice melting is inhibited through the concave ice-water interface formation inward to ice phase. Simulations further reveal that the radius of curvature of the interface formed to stop the ice growth increases with decrease in the degree of supercooling. Our results are in qualitative agreement with the theoretical prediction of the Kelvin effect and thus reveal its operation in the activities of AFPs.

摘要

抗冻蛋白(AFP)的冰生长和融化抑制活性可以更好地用吸附抑制机制来解释。抑制作用是由于吸附在冰晶表面的蛋白质分子引起的开尔文效应所致。然而,最先进的实验技术尚未探索开尔文效应。在这项工作中,通过在冰-水界面上放置黄粉虫抗冻蛋白(TmAFP)进行原子分子动力学模拟,以探测 AFP 机制中开尔文效应的存在。模拟表明,在平衡融解温度以下,冰的生长通过凸面冰-水界面向水相形成而被抑制,而在平衡融解温度以上,冰的融化通过凹面冰-水界面向冰相内部形成而被抑制。模拟进一步表明,阻止冰生长形成的界面的曲率半径随着过冷度的降低而增加。我们的结果与开尔文效应的理论预测定性一致,从而揭示了它在 AFP 活性中的作用。

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