Department of Biomedical Sciences, University of Sassari, Sassari, Italy.
Clinic for Infectious and Tropical Diseases, Clinical Centre of Serbia, Faculty of Medicine, University of Belgrade, Belgrade, Serbia.
Microbiologyopen. 2019 Jan;8(1):e00595. doi: 10.1002/mbo3.595. Epub 2018 Mar 5.
The fungal community of six sand samples from Saudi Arabia and Jordan deserts was characterized by culture-independent analysis via next generation sequencing of the 18S rRNA genes and by culture-dependent methods followed by sequencing of internal transcribed spacer (ITS) region. By 18S sequencing were identified from 163 to 507 OTUs per sample, with a percentage of fungi ranging from 3.5% to 82.7%. The identified fungal Phyla were Ascomycota, Basal fungi, and Basidiomycota and the most abundant detected classes were Dothideomycetes, Pezizomycetes, and Sordariomycetes. A total of 11 colonies of filamentous fungi were isolated and cultured from six samples, and the ITS sequencing pointed toward five different species of the class Sordariomycetes, belonging to genera Fusarium (F. redolens, F. solani, F. equiseti), Chaetomium (C. madrasense), and Albifimbria (A. terrestris). The results of this study show an unexpectedly large fungal biodiversity in the Middle East desert sand and their possible role and implications on human health.
通过对 18S rRNA 基因进行下一代测序的非培养分析和培养依赖性方法(随后对内部转录间隔区(ITS)区域进行测序),对来自沙特阿拉伯和约旦沙漠的 6 个沙样本的真菌群落进行了表征。通过 18S 测序,每个样本鉴定出 163 到 507 个 OTUs,真菌的百分比范围为 3.5%至 82.7%。鉴定出的真菌门为子囊菌门、基础真菌门和担子菌门,最丰富的检测类群为子囊菌门、盘菌门和腔菌门。从 6 个样本中分离和培养了总共 11 株丝状真菌的菌落,ITS 测序表明属于子囊菌门 Sordariomycetes 类的 5 个不同种,属于镰刀菌属(F. redolens、F. solani、F. equiseti)、毛壳菌属(C. madrasense)和白地霉属(A. terrestris)。这项研究的结果表明,中东沙漠沙中存在出乎意料的大量真菌生物多样性,以及它们对人类健康可能产生的作用和影响。