Rojas Patricia, Rodríguez Nuria, de la Fuente Vicenta, Sánchez-Mata Daniel, Amils Ricardo, Sanz José L
a Department of Molecular Biology, Universidad Autónoma de Madrid, Spain.
b Centro de Astrobiología (INTA-CSIC), Spain.
Can J Microbiol. 2018 Jun;64(6):385-392. doi: 10.1139/cjm-2017-0657. Epub 2018 Mar 6.
Soda lakes are inhabited by important haloalkaliphilic microbial communities that are well adapted to these extreme characteristics. The surface waters of the haloalkaline Mono Lake (California, USA) are alkaline but, in contrast to its bottom waters, do not present high salinity. We have studied the microbiota present in the shoreline sediments of Mono Lake using next-generation sequencing techniques. The statistical indexes showed that Bacteria had a higher richness, diversity, and evenness than Archaea. Seventeen phyla and 8 "candidate divisions" were identified among the Bacteria, with a predominance of the phyla Firmicutes, Proteobacteria, and Bacteroidetes. Among the Proteobacteria, there was a notable presence of Rhodoplanes and a high diversity of sulfate-reducing Deltaproteobacteria, in accordance with the high sulfate-reducing activity detected in soda lakes. Numerous families of bacterial fermenters were identified among the Firmicutes. The Bacteroides were represented by several environmental groups that have not yet been isolated. Since final organic matter in anaerobic environments with high sulfate contents is mineralized mainly by sulfate-reducing bacteria, very little methanogenic archaeal biodiversity was detected. Only 2 genera, Methanocalculus and Methanosarcina, were retrieved. The species similarities described indicate that a significant number of the operational taxonomic units identified may represent new species.
苏打湖中有重要的嗜盐碱微生物群落栖息,这些群落能很好地适应这些极端特征。美国加利福尼亚州的盐碱湖莫诺湖的地表水呈碱性,但与底部水域不同,其盐度并不高。我们使用下一代测序技术研究了莫诺湖湖岸沉积物中的微生物群。统计指标显示,细菌的丰富度、多样性和均匀度均高于古菌。在细菌中鉴定出了17个门和8个“候选门”,其中厚壁菌门、变形菌门和拟杆菌门占主导地位。在变形菌门中,红游动菌属显著存在,且硫酸盐还原型δ变形菌的多样性很高,这与在苏打湖中检测到的高硫酸盐还原活性一致。在厚壁菌门中鉴定出了许多细菌发酵菌家族。拟杆菌由几个尚未分离的环境类群代表。由于在高硫酸盐含量的厌氧环境中,最终的有机物主要由硫酸盐还原细菌矿化,因此检测到的产甲烷古菌生物多样性很少。仅检索到2个属,即甲烷计算菌属和甲烷八叠球菌属。所描述的物种相似性表明,所鉴定的大量操作分类单元可能代表新物种。