Departamento de Infectómica y Patogénesis Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (Cinvestav-IPN), Av. Instituto Politécnico Nacional 2508, Col. San Pedro Zacatenco, C.P, 07360, Ciudad de México, Mexico.
Programa de Biomedicina Molecular, Escuela Nacional de Medicina y Homeopatía del Instituto Politécnico Nacional (ENMH-IPN), Guillermo Massieu Helguera 239, Col. La Escalera, C.P, 07320, Ciudad de México, Mexico.
Parasit Vectors. 2018 Mar 7;11(1):153. doi: 10.1186/s13071-018-2698-7.
Entamoeba histolytica is the protozoan parasite responsible for human amebiasis. It causes up to 100,000 deaths worldwide each year. This parasite has two closely related basal transcription factors, the TATA-box binding protein (EhTBP) and the TBP-related factor 1 (EhTRF1). TBP binds to the canonical TATTTAAA-box, as well as to different TATA variants. TRF1 also binds to the TATTTAAA-box. However, their binding capacity to diverse core promoter elements, including the GAAC-element, and their role in gene regulation in this parasite remains unknown.
EMSA experiments were performed to determine the binding capacity of recombinant TBP and TRF1 to TATA variants, GAAC and GAAC-like boxes. For the functional analysis under different stress stimuli (e.g. growth curve, serum depletion, heat-shock, and UV-irradiation) and during the interaction with mammalian cells (erythrocytes, MDCK cell monolayers, and hepatocytes of hamsters), RT-qPCR, and gene knockdown were performed.
Both transcription factors bound to the different TATA variants tested, as well as to the GAAC-boxes, suggesting that they are GAAC-box-binding proteins. The K values determined for TBP and TRF1 for the different TATA variants and GAAC-box were in the range of 10 M to 10 M. During the death phase of growth or in serum depletion, Ehtbp mRNA levels significantly increased, whereas the mRNA level of Ehtrf1 did not change under these conditions. Ehtrf1 gene expression was negatively regulated by UV-irradiation and heat-shock stress, with no changes in Ehtbp gene expression. Moreover, Ehtrf1 gene also showed a negative regulation during erythrophagocytosis, liver abscess formation, and a transient expression level increase at the initial phase of MDCK cell destruction. Finally, the Ehtbp gene knockdown displayed a drastic decrease in the efficiency of erythrophagocytosis in G3 trophozoites.
To our knowledge, this study reveals that these basal transcription factors are able to bind multiple core promoter elements. However, their immediate change in gene expression level in response to different stimuli, as well as during the interaction with mammalian cells, and the diminishing of erythrophagocytosis by silencing the Ehtbp gene indicate the different physiological roles of these transcription factors in E. histolytica.
溶组织内阿米巴是一种引起人类阿米巴病的原生动物寄生虫。它每年在全球造成多达 10 万人死亡。这种寄生虫有两个密切相关的基础转录因子,TATA 结合蛋白(EhTBP)和 TBP 相关因子 1(EhTRF1)。TBP 结合到典型的 TATTTAAA 盒,以及不同的 TATA 变体。TRF1 也与 TATTTAAA 盒结合。然而,它们对不同核心启动子元件(包括 GAAC 元件)的结合能力及其在寄生虫中的基因调控作用尚不清楚。
进行 EMSA 实验以确定重组 TBP 和 TRF1 与 TATA 变体、GAAC 和 GAAC 样盒的结合能力。在不同的应激刺激(如生长曲线、血清耗竭、热休克和 UV 照射)和与哺乳动物细胞(红细胞、MDCK 细胞单层和仓鼠肝细胞)相互作用过程中,进行 RT-qPCR 和基因敲低。
这两种转录因子都与所测试的不同 TATA 变体以及 GAAC 盒结合,表明它们是 GAAC 盒结合蛋白。为不同的 TATA 变体和 GAAC 盒确定的 TBP 和 TRF1 的 K 值在 10^-10 M 到 10^-9 M 范围内。在生长的死亡阶段或血清耗竭时,Ehtbp mRNA 水平显著增加,而在这些条件下 Ehtrf1 mRNA 水平没有变化。Ehtrf1 基因表达受到 UV 照射和热休克应激的负调控,而 Ehtbp 基因表达没有变化。此外,Ehtrf1 基因在红细胞吞噬、肝脓肿形成以及 MDCK 细胞破坏的初始阶段瞬时表达水平增加时也受到负调控。最后,Ehtbp 基因敲低显示 G3 滋养体中红细胞吞噬效率明显降低。
据我们所知,这项研究表明这些基础转录因子能够结合多个核心启动子元件。然而,它们对不同刺激的基因表达水平的即时变化,以及在与哺乳动物细胞相互作用期间,以及通过沉默 Ehtbp 基因减少红细胞吞噬作用,表明这些转录因子在溶组织内阿米巴中的不同生理作用。