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一个新鉴定的花特异剪接变体调控拟南芥雄蕊伸长和内皮层木质化。

A Newly Identified Flower-Specific Splice Variant of Regulates Stamen Elongation and Endothecium Lignification in Arabidopsis.

机构信息

Istituto di Biologia e Patologia Molecolari, Consiglio Nazionale delle Ricerche, Sapienza Università di Roma, 00185 Rome, Italy.

Dipartimento di Biologia e Biotecnologie, Sapienza Università di Roma, 00185 Rome, Italy.

出版信息

Plant Cell. 2018 Mar;30(3):620-637. doi: 10.1105/tpc.17.00840. Epub 2018 Mar 7.

DOI:10.1105/tpc.17.00840
PMID:29514943
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5894849/
Abstract

In addition to the full-length transcript , a splice variant () of the auxin response factor gene has been reported. Here, we identified an intron-retaining variant of , , whose translated product is imported into the nucleus and has tissue-specific localization in By inducibly expressing each variant in flowers, we show that fully complements the short-stamen phenotype of the mutant and restores the expression of , encoding a key regulator of stamen elongation. By contrast, the expression of and had minor or no effects on stamen elongation and expression. Coexpression of and in both the wild type and caused premature anther dehiscence: We show that is responsible for increased expression of the jasmonic acid biosynthetic gene and that is responsible for premature endothecium lignification due to precocious expression of transcription factor gene Finally, we show that ARF8.4 binds to specific auxin-related sequences in both the and promoters and activates their transcription more efficiently than ARF8.2. Our data suggest that ARF8.4 is a tissue-specific functional splice variant that controls filament elongation and endothecium lignification by directly regulating key genes involved in these processes.

摘要

除全长转录本外,生长素反应因子基因的剪接变异体 () 也已被报道。在这里,我们鉴定了一个内含子保留的变体, ,其翻译产物被导入细胞核,并在 中具有组织特异性定位。通过在 花中可诱导表达每种变体,我们表明 完全互补突变体的短雄蕊表型,并恢复编码雄蕊伸长关键调节剂的 的表达。相比之下, 和 的表达对 雄蕊伸长和 的表达几乎没有影响。 和 在野生型和 中的共表达导致花药过早开裂:我们表明 负责增加茉莉酸生物合成基因 的表达,并且 负责由于转录因子基因 的过早表达而导致的早期内皮层木质化。最后,我们表明 ARF8.4 结合到 和 启动子中的特定生长素相关序列,并比 ARF8.2 更有效地激活它们的转录。我们的数据表明,ARF8.4 是一种组织特异性的功能性剪接变体,通过直接调节参与这些过程的关键基因来控制细丝伸长和内皮层木质化。

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本文引用的文献

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Auxin Response Factors: output control in auxin biology.生长素反应因子:生长素生物学中的输出控制。
J Exp Bot. 2018 Jan 4;69(2):179-188. doi: 10.1093/jxb/erx237.
2
Transcription Factor MYB26 Is Key to Spatial Specificity in Anther Secondary Thickening Formation.转录因子MYB26是花药次生增厚形成空间特异性的关键。
Plant Physiol. 2017 Sep;175(1):333-350. doi: 10.1104/pp.17.00719. Epub 2017 Jul 19.
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Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.Araport11:拟南芥参考基因组的完整重新注释。
Plant J. 2017 Feb;89(4):789-804. doi: 10.1111/tpj.13415. Epub 2017 Feb 10.
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High-Resolution Expression Map of the Arabidopsis Root Reveals Alternative Splicing and lincRNA Regulation.拟南芥根的高分辨率表达图谱揭示了可变剪接和长链非编码RNA调控。
Dev Cell. 2016 Nov 21;39(4):508-522. doi: 10.1016/j.devcel.2016.10.012. Epub 2016 Nov 10.
5
An auxin maximum in the middle layer controls stamen development and pollen maturation in Arabidopsis.拟南芥中间层的生长素最大值控制雄蕊发育和花粉成熟。
New Phytol. 2017 Feb;213(3):1194-1207. doi: 10.1111/nph.14207. Epub 2016 Sep 23.
6
Identification, isolation, and expression analysis of heat shock transcription factors in the diploid woodland strawberry Fragaria vesca.二倍体森林草莓(弗州草莓)中热激转录因子的鉴定、分离及表达分析
Front Plant Sci. 2015 Sep 15;6:736. doi: 10.3389/fpls.2015.00736. eCollection 2015.
7
Enter exitrons.引入外显子内子。 (注:这里“exitrons”可能是生僻或错误的专业术语,正常的类似概念是“introns”即内含子,推测原文可能有误,以上是按照给定英文准确翻译)
Genome Biol. 2015 Jul 7;16(1):136. doi: 10.1186/s13059-015-0704-3.
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Unmasking alternative splicing inside protein-coding exons defines exitrons and their role in proteome plasticity.揭示蛋白质编码外显子内部的可变剪接定义了外显子内终止子及其在蛋白质组可塑性中的作用。
Genome Res. 2015 Jul;25(7):995-1007. doi: 10.1101/gr.186585.114. Epub 2015 May 1.
9
Subcellular compartmentalization in protoplasts from Artemisia annua cell cultures: engineering attempts using a modified SNARE protein.黄花蒿细胞培养原生质体中的亚细胞区室化:利用修饰的SNARE蛋白的工程学尝试。
J Biotechnol. 2015 May 20;202:146-52. doi: 10.1016/j.jbiotec.2014.11.016. Epub 2014 Nov 29.
10
Cell elongation is regulated through a central circuit of interacting transcription factors in the Arabidopsis hypocotyl.拟南芥下胚轴中的细胞伸长是通过相互作用的转录因子组成的核心回路来调控的。
Elife. 2014 May 27;3:e03031. doi: 10.7554/eLife.03031.