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基于rRNA分析的波罗的海表层沉积物寡盐-海洋过渡区底栖细菌群落组成

Benthic Bacterial Community Composition in the Oligohaline-Marine Transition of Surface Sediments in the Baltic Sea Based on rRNA Analysis.

作者信息

Klier Julia, Dellwig Olaf, Leipe Thomas, Jürgens Klaus, Herlemann Daniel P R

机构信息

Department of Biological Oceanography, Leibniz Institute for Baltic Sea Research, Rostock, Germany.

Department of Marine Geology, Leibniz Institute for Baltic Sea Research, Rostock, Germany.

出版信息

Front Microbiol. 2018 Feb 19;9:236. doi: 10.3389/fmicb.2018.00236. eCollection 2018.

Abstract

Salinity has a strong impact on bacterial community composition such that freshwater bacterial communities are very different from those in seawater. By contrast, little is known about the composition and diversity of the bacterial community in the sediments (bacteriobenthos) at the freshwater-seawater transition (mesohaline conditions). In this study, partial 16S-rRNA sequences were used to investigate the bacterial community at five stations, representing almost freshwater (oligohaline) to marine conditions, in the Baltic Sea. Samples were obtained from the silty, top-layer (0-2.5 cm) sediments with mostly oxygenated conditions. The long water residence time characteristic of the Baltic Sea, was predicted to enable the development of autochthonous bacteriobenthos at mesohaline conditions. Our results showed that, similar to the water column, salinity is a major factor in structuring the bacteriobenthos and that there is no loss of bacterial richness at intermediate salinities. The bacterial communities of marine, mesohaline, and oligohaline sediments differed in terms of the relative rRNA abundances of the major bacterial phyla/classes. At mesohaline conditions typical marine and oligohaline operational taxonomic units (OTUs) were abundant. Putative unique OTUs in mesohaline sediments were present only at low abundances, suggesting that the mesohaline environment consists mainly of marine and oligohaline bacteria with a broad salinity tolerance. Our study provides a first overview of the diversity patterns and composition of bacteria in the sediments along the Baltic Sea salinity gradient as well as new insights into the bacteriobenthos at mesohaline conditions.

摘要

盐度对细菌群落组成有强烈影响,使得淡水细菌群落与海水中的细菌群落有很大差异。相比之下,对于淡水 - 海水过渡区(中盐度条件)沉积物(底栖细菌)中细菌群落的组成和多样性知之甚少。在本研究中,部分16S - rRNA序列被用于调查波罗的海五个代表几乎淡水(低盐度)到海洋条件的站点的细菌群落。样本取自大多处于有氧条件的粉质表层(0 - 2.5厘米)沉积物。波罗的海具有长水停留时间的特征,预计这有利于在中盐度条件下发展本地底栖细菌。我们的结果表明,与水柱情况类似,盐度是构建底栖细菌群落的主要因素,并且在中等盐度下细菌丰富度没有损失。海洋、中盐度和低盐度沉积物的细菌群落在主要细菌门/纲的相对rRNA丰度方面存在差异。在中盐度条件下,典型的海洋和低盐度操作分类单元(OTU)丰富。中盐度沉积物中假定的独特OTU仅以低丰度存在,这表明中盐度环境主要由具有广泛盐度耐受性的海洋和低盐度细菌组成。我们的研究首次概述了波罗的海盐度梯度沿线沉积物中细菌的多样性模式和组成,以及对中盐度条件下底栖细菌的新见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d7c0/5827536/4b725a183e81/fmicb-09-00236-g001.jpg

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