Brick Kevin, Pratto Florencia, Sun Chi-Yu, Camerini-Otero Rafael D, Petukhova Galina
Genetics & Biochemistry Branch, NIDDK, National Institutes of Health, Bethesda, MD, United States.
Uniformed Services University of the Health Sciences, Bethesda, MD, United States.
Methods Enzymol. 2018;601:391-418. doi: 10.1016/bs.mie.2017.11.037. Epub 2018 Feb 26.
The repair of programmed DNA double-strand breaks (DSBs) physically tethers homologous chromosomes in meiosis to allow for accurate segregation through meiotic cell divisions. This process, known as recombination, also results in the exchange of alleles between parental chromosomes and contributes to genetic diversity. In mammals, meiotic DSBs occur predominantly in a small fraction of the genome, at sites known as hotspots. Studies of the formation and repair of meiotic DSBs in mammals are challenging, because few cells undergo meiotic DSB formation at a given time. To better understand the initiation and control of meiotic recombination in mammals, we have devised a highly sensitive method to map the sites of meiotic DSBs genome wide. Our method first isolates DNA bound to DSB repair proteins and then specifically sequences the associated single-stranded DNA. This protocol has generated the first meiotic DSB maps in several mammals and the only map of meiotic DSBs in humans.
程序性DNA双链断裂(DSB)的修复在减数分裂过程中通过物理方式将同源染色体连接在一起,以便通过减数分裂细胞分裂进行准确的分离。这个过程,即重组,还会导致亲本染色体之间的等位基因交换,并有助于遗传多样性。在哺乳动物中,减数分裂DSB主要发生在基因组的一小部分,即所谓的热点区域。由于在给定时间很少有细胞经历减数分裂DSB形成,因此对哺乳动物减数分裂DSB的形成和修复进行研究具有挑战性。为了更好地理解哺乳动物减数分裂重组的起始和控制,我们设计了一种高度灵敏的方法来全基因组定位减数分裂DSB的位点。我们的方法首先分离与DSB修复蛋白结合的DNA,然后对相关的单链DNA进行特异性测序。该方案已生成了几种哺乳动物的首张减数分裂DSB图谱,也是人类减数分裂DSB的唯一图谱。