Methodology and Data Analysis, Department of Psychology, University of Geneva, Geneva, Switzerland.
Neuroscience of Emotion and Affective Dynamics Lab, Department of Psychology, University of Geneva, Geneva, Switzerland.
Stat Med. 2018 May 20;37(11):1910-1931. doi: 10.1002/sim.7621. Epub 2018 Mar 15.
This article proposes a systematic methodological review and an objective criticism of existing methods enabling the derivation of time, frequency, and time-varying Granger-causality statistics in neuroscience. The capacity to describe the causal links between signals recorded at different brain locations during a neuroscience experiment is indeed of primary interest for neuroscientists, who often have very precise prior hypotheses about the relationships between recorded brain signals. The increasing interest and the huge number of publications related to this topic calls for this systematic review, which describes the very complex methodological aspects underlying the derivation of these statistics. In this article, we first present a general framework that allows us to review and compare Granger-causality statistics in the time domain, and the link with transfer entropy. Then, the spectral and the time-varying extensions are exposed and discussed together with their estimation and distributional properties. Although not the focus of this article, partial and conditional Granger causality, dynamical causal modelling, directed transfer function, directed coherence, partial directed coherence, and their variant are also mentioned.
本文提出了一种系统的方法学综述和对现有的方法进行客观批评,这些方法可以在神经科学中推导出时间、频率和时变 Granger 因果统计数据。在神经科学实验中,描述记录在不同脑区的信号之间的因果关系的能力确实是神经科学家非常感兴趣的,因为他们通常对记录的脑信号之间的关系有非常精确的先验假设。由于人们对这个话题的兴趣日益浓厚,相关出版物也大量涌现,因此需要进行这种系统的综述,描述推导出这些统计数据所涉及的非常复杂的方法学方面。在本文中,我们首先提出了一个通用框架,允许我们在时域中回顾和比较 Granger 因果统计,并与传递熵建立联系。然后,我们展示并讨论了频谱和时变扩展,以及它们的估计和分布特性。虽然不是本文的重点,但部分和条件 Granger 因果关系、动态因果建模、有向传递函数、有向相干性、部分有向相干性及其变体也被提及。