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自组装三芳族肽体系中的结构多态性。

Structural Polymorphism in a Self-Assembled Tri-Aromatic Peptide System.

机构信息

Department of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Sciences , Tel Aviv University , Tel Aviv 69978 , Israel.

Department of Chemical Physics, School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences , Tel Aviv University , Tel Aviv 69978 , Israel.

出版信息

ACS Nano. 2018 Apr 24;12(4):3253-3262. doi: 10.1021/acsnano.7b07723. Epub 2018 Mar 23.

Abstract

Self-assembly is a process of key importance in natural systems and in nanotechnology. Peptides are attractive building blocks due to their relative facile synthesis, biocompatibility, and other unique properties. Diphenylalanine (FF) and its derivatives are known to form nanostructures of various architectures and interesting and varied characteristics. The larger triphenylalanine peptide (FFF) was found to self-assemble as efficiently as FF, forming related but distinct architectures of plate-like and spherical nanostructures. Here, to understand the effect of triaromatic systems on the self-assembly process, we examined carboxybenzyl-protected diphenylalanine (z-FF) as a minimal model for such an arrangement. We explored different self-assembly conditions by changing solvent compositions and peptide concentrations, generating a phase diagram for the assemblies. We discovered that z-FF can form a variety of structures, including nanowires, fibers, nanospheres, and nanotoroids, the latter were previously observed only in considerably larger or co-assembly systems. Secondary structure analysis revealed that all assemblies possessed a β-sheet conformation. Additionally, in solvent combinations with high water ratios, z-FF formed rigid and self-healing hydrogels. X-ray crystallography revealed a "wishbone" structure, in which z-FF dimers are linked by hydrogen bonds mediated by methanol molecules, with a 2-fold screw symmetry along the c-axis. All-atom molecular dynamics (MD) simulations revealed conformations similar to the crystal structure. Coarse-grained MD simulated the assembly of the peptide into either fibers or spheres in different solvent systems, consistent with the experimental results. This work thus expands the building block library for the fabrication of nanostructures by peptide self-assembly.

摘要

自组装在自然系统和纳米技术中是一个至关重要的过程。由于其相对容易的合成、生物相容性和其他独特的性质,肽是有吸引力的构建块。众所周知,二苯丙氨酸(FF)及其衍生物可以形成各种结构的纳米结构,具有有趣和多样的特性。较大的三苯丙氨酸肽(FFF)被发现能够像 FF 一样有效地自组装,形成相关但不同的板状和球形纳米结构。在这里,为了了解三芳基系统对自组装过程的影响,我们研究了羧基苄基保护的二苯丙氨酸(z-FF)作为这种排列的最小模型。我们通过改变溶剂组成和肽浓度来探索不同的自组装条件,生成了组装的相图。我们发现 z-FF 可以形成多种结构,包括纳米线、纤维、纳米球和纳米环,后一种结构以前仅在相当大或共组装系统中观察到。二级结构分析表明,所有组装体都具有β-折叠构象。此外,在具有高水比例的溶剂组合中,z-FF 形成刚性和自修复水凝胶。X 射线晶体学揭示了一种“叉骨”结构,其中 z-FF 二聚体通过甲醇分子介导的氢键连接,沿 c 轴具有 2 重螺旋对称。全原子分子动力学(MD)模拟揭示了与晶体结构相似的构象。粗粒 MD 模拟了在不同溶剂系统中肽组装成纤维或球体的情况,与实验结果一致。这项工作因此扩展了通过肽自组装制造纳米结构的构建块库。

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