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类蛋白酶 ClpXP 和 PAS 结构域蛋白 DivL 调控荚膜红细菌 CtrA 和基因转移因子的产生。

The Protease ClpXP and the PAS Domain Protein DivL Regulate CtrA and Gene Transfer Agent Production in Rhodobacter capsulatus.

机构信息

Department of Microbiology and Immunology, The University of British Columbia, Vancouver, BC, Canada.

Department of Biochemistry and Molecular Biology, The University of British Columbia, Vancouver, BC, Canada.

出版信息

Appl Environ Microbiol. 2018 May 17;84(11). doi: 10.1128/AEM.00275-18. Print 2018 Jun 1.

Abstract

Several members of the () produce a conserved horizontal gene transfer vector, called the gene transfer agent (GTA), that appears to have evolved from a bacteriophage. The model system used to study GTA biology is the GTA (RcGTA), a small, tailed bacteriophage-like particle produced by a subset of the cells in a culture. The response regulator CtrA is conserved in the and is an essential regulator of RcGTA production: it controls the production and maturation of the RcGTA particle and RcGTA release from cells. CtrA also controls the natural transformation-like system required for cells to receive RcGTA-donated DNA. Here, we report that dysregulation of the CckA-ChpT-CtrA phosphorelay either by the loss of the PAS domain protein DivL or by substitution of the autophosphorylation residue of the hybrid histidine kinase CckA decreased CtrA phosphorylation and greatly increased RcGTA protein production in We show that the loss of the ClpXP protease or the three C-terminal residues of CtrA results in increased CtrA levels in and identify ClpX(P) to be essential for the maturation of RcGTA particles. Furthermore, we show that CtrA phosphorylation is important for head spike production. Our results provide novel insight into the regulation of CtrA and GTAs in the Members of the are abundant in ocean and freshwater environments. The conserved GTA produced by many may have an important role in horizontal gene transfer (HGT) in aquatic environments and provide a significant contribution to their adaptation. GTA production is controlled by bacterial regulatory systems, including the conserved CckA-ChpT-CtrA phosphorelay; however, several questions about GTA regulation remain. Our identification that a short DivL homologue and ClpXP regulate CtrA in extends the model of CtrA regulation from to a member of the We found that the magnitude of RcGTA production greatly depends on DivL and CckA kinase activity, adding yet another layer of regulatory complexity to RcGTA. RcGTA is known to undergo CckA-dependent maturation, and we extend the understanding of this process by showing that the ClpX chaperone is required for formation of tailed, DNA-containing particles.

摘要

几种 ()成员产生一种保守的水平基因转移载体,称为基因转移剂(GTA),它似乎是从噬菌体进化而来的。用于研究 GTA 生物学的模型系统是 GTA(RcGTA),这是一种由培养物中一部分细胞产生的小型、有尾的噬菌体样颗粒。响应调节剂 CtrA 在 中保守,是 RcGTA 产生的必需调节剂:它控制 RcGTA 颗粒的产生和成熟以及细胞中 RcGTA 的释放。CtrA 还控制细胞接收 RcGTA 捐赠 DNA 所需的自然转化样系统。在这里,我们报告说,CckA-ChpT-CtrA 磷酸传递系统的失调,无论是通过 PAS 结构域蛋白 DivL 的缺失还是通过混合组氨酸激酶 CckA 的自磷酸化残基的取代,都会降低 CtrA 的磷酸化并大大增加 在 中 RcGTA 蛋白的产生。我们表明,ClpXP 蛋白酶的缺失或 CtrA 的三个 C 末端残基的缺失会导致 中 CtrA 水平升高,并鉴定出 ClpX(P) 是 RcGTA 颗粒成熟所必需的。此外,我们表明 CtrA 磷酸化对于头部刺突的产生很重要。我们的结果为 中 CtrA 和 GTA 的调控提供了新的见解。 成员在海洋和淡水环境中非常丰富。许多 产生的保守 GTA 可能在水生环境中的水平基因转移(HGT)中发挥重要作用,并为它们的适应做出重大贡献。GTA 的产生受细菌调节系统的控制,包括保守的 CckA-ChpT-CtrA 磷酸传递系统;然而,关于 GTA 调节仍有几个问题。我们发现,短的 DivL 同源物和 ClpXP 调节 中的 CtrA,将 CtrA 调节的模型从 扩展到了 的一个成员。我们发现,RcGTA 的产生幅度极大地取决于 DivL 和 CckA 激酶的活性,这为 RcGTA 增加了另一层调节复杂性。已知 RcGTA 经历 CckA 依赖性成熟,我们通过表明 ClpX 伴侣蛋白是形成有尾、含 DNA 颗粒所必需的,扩展了对该过程的理解。

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本文引用的文献

1
Packaging of Dinoroseobacter shibae DNA into Gene Transfer Agent Particles Is Not Random.
Genome Biol Evol. 2018 Jan 1;10(1):359-369. doi: 10.1093/gbe/evy005.
2
The Rhodobacter capsulatus gene transfer agent is induced by nutrient depletion and the RNAP omega subunit.
Microbiology (Reading). 2017 Sep;163(9):1355-1363. doi: 10.1099/mic.0.000519. Epub 2017 Sep 4.
3
The Distribution, Evolution, and Roles of Gene Transfer Agents in Prokaryotic Genetic Exchange.
Annu Rev Virol. 2017 Sep 29;4(1):87-104. doi: 10.1146/annurev-virology-101416-041624. Epub 2017 Aug 7.
5
Regulated Proteolysis in Bacteria: Caulobacter.
Annu Rev Genet. 2016 Nov 23;50:423-445. doi: 10.1146/annurev-genet-120215-035235. Epub 2016 Oct 13.
6
Functional and Evolutionary Characterization of a Gene Transfer Agent's Multilocus "Genome".
Mol Biol Evol. 2016 Oct;33(10):2530-43. doi: 10.1093/molbev/msw125. Epub 2016 Jun 24.
8
The Gene Transfer Agent RcGTA Contains Head Spikes Needed for Binding to the Rhodobacter capsulatus Polysaccharide Cell Capsule.
J Mol Biol. 2016 Jan 29;428(2 Pt B):477-91. doi: 10.1016/j.jmb.2015.12.010. Epub 2015 Dec 19.
9
Correct Assembly of the Bacteriophage T5 Procapsid Requires Both the Maturation Protease and the Portal Complex.
J Mol Biol. 2016 Jan 16;428(1):165-181. doi: 10.1016/j.jmb.2015.11.019. Epub 2015 Nov 23.
10
Horizontal gene transfer: building the web of life.
Nat Rev Genet. 2015 Aug;16(8):472-82. doi: 10.1038/nrg3962.

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