• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

生长中细菌内蛋白质簇定位的物理模型。

Physical model of protein cluster positioning in growing bacteria.

作者信息

Wasnik Vaibhav, Wang Hui, Wingreen Ned S, Mukhopadhyay Ranjan

机构信息

Department of Physics, Clark University, Worcester, MA 01610.

Department of Molecular Biology, Princeton University, Princeton, NJ 08544.

出版信息

New J Phys. 2017;19(10). doi: 10.1088/1367-2630/aa8247. Epub 2017 Oct 11.

DOI:10.1088/1367-2630/aa8247
PMID:29628783
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5885638/
Abstract

Chemotaxic receptors in bacteria form clusters at cell poles and also laterally, and this clustering plays an important role in signal transduction. These clusters were found to be periodically arranged on the surface of the bacterium Escherichia coli, independent of any known positioning mechanism. In this work we extend a model based on diffusion and aggregation to more realistic geometries and present a means based on "bursty" protein production to distinguish spontaneous positioning from an independently existing positioning mechanism. We also consider the case of isotropic cellular growth and characterize the degree of order arising spontaneously. Our model could also be relevant for other examples of periodically positioned protein clusters in bacteria.

摘要

细菌中的趋化性受体在细胞两极以及侧面形成簇,这种簇集在信号转导中起着重要作用。人们发现这些簇在大肠杆菌表面呈周期性排列,且独立于任何已知的定位机制。在这项工作中,我们将基于扩散和聚集的模型扩展到更实际的几何形状,并提出一种基于“爆发式”蛋白质产生的方法,以区分自发定位和独立存在的定位机制。我们还考虑了各向同性细胞生长的情况,并表征自发产生的有序程度。我们的模型也可能适用于细菌中其他周期性定位的蛋白质簇的例子。

相似文献

1
Physical model of protein cluster positioning in growing bacteria.生长中细菌内蛋白质簇定位的物理模型。
New J Phys. 2017;19(10). doi: 10.1088/1367-2630/aa8247. Epub 2017 Oct 11.
2
Self-organized periodicity of protein clusters in growing bacteria.生长细菌中蛋白质簇的自组织周期性
Phys Rev Lett. 2008 Nov 21;101(21):218101. doi: 10.1103/PhysRevLett.101.218101. Epub 2008 Nov 20.
3
Positioning of chemosensory clusters in E. coli and its relation to cell division.大肠杆菌中化学感应簇的定位及其与细胞分裂的关系。
EMBO J. 2007 Mar 21;26(6):1615-23. doi: 10.1038/sj.emboj.7601610. Epub 2007 Mar 1.
4
Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.在流行地区,服用抗叶酸抗疟药物的人群中,叶酸补充剂与疟疾易感性和严重程度的关系。
Cochrane Database Syst Rev. 2022 Feb 1;2(2022):CD014217. doi: 10.1002/14651858.CD014217.
5
Stochastic assembly of chemoreceptor clusters in Escherichia coli.大肠杆菌中化学感受器簇的随机组装。
Mol Microbiol. 2008 Jun;68(5):1228-36. doi: 10.1111/j.1365-2958.2008.06227.x.
6
Generating and exploiting polarity in bacteria.在细菌中产生和利用极性。
Science. 2002 Dec 6;298(5600):1942-6. doi: 10.1126/science.1072163.
7
Long-term positioning and polar preference of chemoreceptor clusters in E. coli.大肠杆菌中化感感受体簇的长期定位和极性偏好。
Nat Commun. 2018 Oct 25;9(1):4444. doi: 10.1038/s41467-018-06835-5.
8
Can a Flux-Based Mechanism Explain Protein Cluster Positioning in a Three-Dimensional Cell Geometry?基于通量的机制能否解释三维细胞几何形状中蛋白质簇的定位?
Biophys J. 2019 Aug 6;117(3):420-428. doi: 10.1016/j.bpj.2019.06.031. Epub 2019 Jul 4.
9
Phenotypic Heterogeneity in Sugar Utilization by Is Generated by Stochastic Dispersal of the General PTS Protein EI from Polar Clusters.通用磷酸转移酶系统蛋白EI从极性簇的随机分散导致了其在糖利用方面的表型异质性。
Front Microbiol. 2018 Jan 17;8:2695. doi: 10.3389/fmicb.2017.02695. eCollection 2017.
10
Self-organization of the Escherichia coli chemotaxis network imaged with super-resolution light microscopy.用超分辨率光学显微镜成像的大肠杆菌趋化网络的自组织。
PLoS Biol. 2009 Jun 16;7(6):e1000137. doi: 10.1371/journal.pbio.1000137. Epub 2009 Jun 23.

引用本文的文献

1
Quantitative dynamics of reversible platelet aggregation: mathematical modelling and experiments.血小板可逆聚集的定量动力学:数学建模与实验。
Sci Rep. 2019 Apr 17;9(1):6217. doi: 10.1038/s41598-019-42701-0.

本文引用的文献

1
Origins of chemoreceptor curvature sorting in Escherichia coli.大肠杆菌中化学感受器曲率分选的起源。
Nat Commun. 2017 Mar 21;8:14838. doi: 10.1038/ncomms14838.
2
Optogenetic switches for light-controlled gene expression in yeast.酵母中光控基因表达的光遗传学开关。
Appl Microbiol Biotechnol. 2017 Apr;101(7):2629-2640. doi: 10.1007/s00253-017-8178-8. Epub 2017 Feb 16.
3
Physics of Intracellular Organization in Bacteria.细菌细胞内组织的物理特性。
Annu Rev Microbiol. 2015;69:361-79. doi: 10.1146/annurev-micro-091014-104313.
4
Modeling curvature-dependent subcellular localization of the small sporulation protein SpoVM in Bacillus subtilis.枯草芽孢杆菌中小芽孢形成蛋白SpoVM的曲率依赖性亚细胞定位建模
PLoS One. 2015 Jan 27;10(1):e0111971. doi: 10.1371/journal.pone.0111971. eCollection 2015.
5
Promoter architecture dictates cell-to-cell variability in gene expression.启动子结构决定基因表达中的细胞间变异性。
Science. 2014 Dec 19;346(6216):1533-6. doi: 10.1126/science.1255301. Epub 2014 Dec 18.
6
The role of membrane-mediated interactions in the assembly and architecture of chemoreceptor lattices.膜介导的相互作用在化学感受器晶格组装和结构中的作用。
PLoS Comput Biol. 2014 Dec 11;10(12):e1003932. doi: 10.1371/journal.pcbi.1003932. eCollection 2014 Dec.
7
The sensory histidine kinases TorS and EvgS tend to form clusters in Escherichia coli cells.在大肠杆菌细胞中,感觉组氨酸激酶 TorS 和 EvgS 往往会形成簇。
PLoS One. 2013 Oct 11;8(10):e77708. doi: 10.1371/journal.pone.0077708. eCollection 2013.
8
Subcellular protein localization by using a genetically encoded fluorescent amino acid.利用基因编码荧光氨基酸进行亚细胞蛋白质定位。
Chembiochem. 2011 Aug 16;12(12):1818-21. doi: 10.1002/cbic.201100282. Epub 2011 Jun 16.
9
Cell cycle coordination and regulation of bacterial chromosome segregation dynamics by polarly localized proteins.细胞周期的协调和极性定位蛋白对细菌染色体分离动力学的调控。
EMBO J. 2010 Sep 15;29(18):3068-81. doi: 10.1038/emboj.2010.207. Epub 2010 Aug 27.
10
Self-organization of the Escherichia coli chemotaxis network imaged with super-resolution light microscopy.用超分辨率光学显微镜成像的大肠杆菌趋化网络的自组织。
PLoS Biol. 2009 Jun 16;7(6):e1000137. doi: 10.1371/journal.pbio.1000137. Epub 2009 Jun 23.