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间皮瘤中非编码转录本异质性:来自石棉暴露小鼠的见解。

Non-Coding Transcript Heterogeneity in Mesothelioma: Insights from Asbestos-Exposed Mice.

机构信息

Laboratory of Molecular Oncology, Lungen- und Thoraxonkologie Zentrum, University Hospital Zurich, Sternwartstrasse 14, 8091 Zürich, Switzerland.

Functional Genomics Center Zurich, ETH Zurich and University of Zurich, 8057 Zurich, Switzerland.

出版信息

Int J Mol Sci. 2018 Apr 11;19(4):1163. doi: 10.3390/ijms19041163.

DOI:10.3390/ijms19041163
PMID:29641489
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5979355/
Abstract

Mesothelioma is an aggressive, rapidly fatal cancer and a better understanding of its molecular heterogeneity may help with making more efficient therapeutic strategies. Non-coding RNAs represent a larger part of the transcriptome but their contribution to diseases is not fully understood yet. We used recently obtained RNA-seq data from asbestos-exposed mice and performed data mining of publicly available datasets in order to evaluate how non-coding RNA contribute to mesothelioma heterogeneity. Nine non-coding RNAs are specifically elevated in mesothelioma tumors and contribute to human mesothelioma heterogeneity. Because some of them have known oncogenic properties, this study supports the concept of non-coding RNAs as cancer progenitor genes.

摘要

间皮瘤是一种侵袭性的、快速致命的癌症,更好地了解其分子异质性可能有助于制定更有效的治疗策略。非编码 RNA 占转录组的比例更大,但它们对疾病的贡献尚未完全了解。我们使用最近从暴露于石棉的小鼠中获得的 RNA-seq 数据,并对公开可用的数据集进行数据挖掘,以评估非编码 RNA 如何促进间皮瘤异质性。有 9 种非编码 RNA 在间皮瘤肿瘤中特异性升高,并导致人类间皮瘤异质性。由于其中一些具有已知的致癌特性,因此这项研究支持非编码 RNA 作为癌症祖基因的概念。

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本文引用的文献

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Live-Cell Mesothelioma Biobank to Explore Mechanisms of Tumor Progression.用于探索肿瘤进展机制的活细胞间皮瘤生物样本库
Front Oncol. 2018 Feb 23;8:40. doi: 10.3389/fonc.2018.00040. eCollection 2018.
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How asbestos drives the tissue towards tumors: YAP activation, macrophage and mesothelial precursor recruitment, RNA editing, and somatic mutations.石棉如何促使组织向肿瘤发展:YAP 激活、巨噬细胞和间皮前体细胞募集、RNA 编辑和体细胞突变。
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RNA序列与微阵列数据的联合分析揭示了一种竞争性内源性RNA网络作为恶性胸膜间皮瘤的新型预后标志物。
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The Biology of Malignant Mesothelioma and the Relevance of Preclinical Models.恶性间皮瘤的生物学特性及临床前模型的相关性
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Special Issue on Mechanisms of Mesothelioma Heterogeneity: Highlights and Open Questions.关于间皮瘤异质性机制的特刊:亮点和未解决的问题。
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长链非编码RNA-HOXA-AS2/EZH2/LSD1致癌基因复合物促进胰腺癌细胞增殖。
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