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异化生物降解途径的演变:在邻苯二甲酸酯厌氧降解过程中不稳定的邻苯二甲酰辅酶 A 中间产物的形成和捕获。

Evolution of a xenobiotic degradation pathway: formation and capture of the labile phthaloyl-CoA intermediate during anaerobic phthalate degradation.

机构信息

Faculty of Biology - Microbiology, University of Freiburg, Freiburg, Germany.

出版信息

Mol Microbiol. 2018 Jun;108(6):614-626. doi: 10.1111/mmi.13962. Epub 2018 Apr 26.

DOI:10.1111/mmi.13962
PMID:29645305
Abstract

Xenobiotic phthalates are industrially produced on the annual million ton scale. The oxygen-independent enzymatic reactions involved in anaerobic phthalate degradation have only recently been elucidated. In vitro assays suggested that phthalate is first activated to phthaloyl-CoA followed by decarboxylation to benzoyl-CoA. Here, we report the heterologous production and characterization of the enzyme initiating anaerobic phthalate degradation from 'Aromatoleum aromaticum': a highly specific succinyl-CoA:phthalate CoA transferase (SPT, class III CoA transferase). Phthaloyl-CoA formed by SPT accumulated only to sub-micromolar concentrations due to the extreme lability of the product towards intramolecular substitution with a half-life of around 7 min. Upon addition of excess phthaloyl-CoA decarboxylase (PCD), the combined activity of both enzymes was drastically shifted towards physiologically relevant benzoyl-CoA formation. In conclusion, a massive overproduction of PCD in phthalate-grown cells to concentrations >140 μM was observed that allowed for efficient phthaloyl-CoA conversion at concentrations 250-fold below the apparent K -value of PCD. The results obtained provide insights into an only recently evolved xenobiotic degradation pathway where a massive cellular overproduction of PCD compensates for the formation of the probably most unstable CoA ester intermediate in biology.

摘要

邻苯二甲酸酯等外源性污染物的年排放量达百万吨级。近年来,人们对其在厌氧条件下的降解途径的研究逐渐深入。体外实验表明,邻苯二甲酸首先被激活为邻苯二甲酰辅酶 A,然后脱羧形成苯甲酰辅酶 A。在此,我们报道了一种来自芳香杆菌(Aromatoleum aromaticum)的邻苯二甲酸厌氧降解途径起始酶——高度特异性的琥珀酰辅酶 A:邻苯二甲酸辅酶 A 转移酶(SPT,III 类辅酶 A 转移酶)的异源生产和特性。由于产物邻苯二甲酰辅酶 A 极易发生分子内取代,半衰期约为 7 分钟,因此仅能积累到亚微米级浓度。当加入过量的邻苯二甲酰辅酶 A 脱羧酶(PCD)时,两种酶的联合活性会明显向生理相关的苯甲酰辅酶 A 形成方向转移。综上所述,在邻苯二甲酸生长的细胞中,PCD 会被大量过度表达,浓度超过 140 μM,从而可以在 PCD 的表观 K m 值低 250 倍的浓度下有效地将邻苯二甲酰辅酶 A 转化。该研究结果为人们深入了解最近才出现的外源性污染物降解途径提供了新的见解,该途径中,PCD 的大量过度表达补偿了生物体内可能最不稳定的辅酶 A 酯中间产物的形成。

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