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ISMap元件靶向巢式聚合酶链反应用于检测牛和水牛粪便样本中的亚种。

ISMap element targeted nested polymerase chain in the detection of subsp. in fecal samples of cattle and buffaloes.

作者信息

Rani Mamta, Narang Deepti, Kumar Dinesh, Chandra Mudit, Singh Sikh Tejinder, Filia G

机构信息

Department of Veterinary Microbiology, College of Veterinary Science, Guru Angad Dev Veterinary and Animal Sciences University, Ludhiana, Punjab, India.

Directorate of Livestock Farms, College of Veterinary Science, Guru Angad Dev Veterinary and Animal Sciences University, Ludhiana, Punjab, India.

出版信息

Vet World. 2018 Mar;11(3):397-401. doi: 10.14202/vetworld.2018.397-401. Epub 2018 Mar 31.

Abstract

BACKGROUND AND AIM

Johne's disease is chronic granulomatous enteritis which affects ruminants. There are many diagnostic approaches for the detection of subsp. (MAP) of which molecular detection methods using various elements are less time consuming and more accurate. The present study was conducted using ISMap element for nested polymerase chain reaction (nPCR) based detection of MAP in fecal samples. The aim was to test the sensitivity and specificity of the ISMap element and also to use this element for the detection of MAP in fecal samples of cattle and buffaloes.

MATERIALS AND METHODS

A total of 211 fecal samples of cattle and buffaloes from different herds around Ludhiana aged between 2 and 13 years were collected, and DNA extraction was done from these samples. The nPCR was carried out for the detection of MAP in fecal samples.

RESULTS

The ISMap element was specific for the detection of MAP only and showed a sensitivity of detection of 7.6 fg/µL of the standard genomic DNA. Among the 211 fecal samples of cattle and buffaloes tested for the ISMap element, 18 samples (8.5%) were positive for MAP.

CONCLUSION

The ISMap element is specific and sensitive for the detection of MAP in various samples, and when used in nPCR format, it can increase the sensitivity of detection.

摘要

背景与目的

副结核是一种影响反刍动物的慢性肉芽肿性肠炎。检测副结核分枝杆菌亚种(MAP)有多种诊断方法,其中使用各种元件的分子检测方法耗时较少且更准确。本研究使用ISMap元件通过巢式聚合酶链反应(nPCR)检测粪便样本中的MAP。目的是测试ISMap元件的敏感性和特异性,并将该元件用于检测牛和水牛粪便样本中的MAP。

材料与方法

收集了卢迪亚纳周围不同牛群中2至13岁的牛和水牛的211份粪便样本,并从这些样本中提取DNA。对粪便样本进行nPCR以检测MAP。

结果

ISMap元件仅对MAP的检测具有特异性,对标准基因组DNA的检测灵敏度为7.6 fg/µL。在检测ISMap元件的211份牛和水牛粪便样本中,18份样本(8.5%)MAP呈阳性。

结论

ISMap元件对各种样本中MAP的检测具有特异性和敏感性,以nPCR形式使用时,可提高检测灵敏度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9250/5891858/2e4e26709007/VetWorld-11-397-g001.jpg

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