Citrus Research and Education Center, Department of Plant Pathology, University of Florida/Institute of Food and Agricultural Sciences, Lake Alfred, FL, USA.
China-USA Citrus Huanglongbing Joint Laboratory (A joint laboratory of The University of Florida's Institute of Food and Agricultural Sciences and Gannan Normal University), National Navel Orange Engineering Research Center, Gannan Normal University, Ganzhou, Jiangxi, China; Citrus Research and Education Center, Department of Microbiology and Cell Science, University of Florida/Institute of Food and Agricultural Sciences, Lake Alfred, FL, USA.
Genomics. 2019 Jul;111(4):729-736. doi: 10.1016/j.ygeno.2018.04.011. Epub 2018 Apr 17.
Genome sequencing is commonly used in research laboratories right now thanks to the rise of high-throughput sequencing with higher speed and output-to-cost ratios. Here, we summarized the application of genomics in different aspects of plant bacterial pathosystems. Genomics has been used in studying the mechanisms of plant-bacteria interactions, and host specificity. It also helps with taxonomy, study of non-cultured bacteria, identification of causal agent, single cell sequencing, population genetics, and meta-transcriptomic. Overall, genomics has significantly improved our understanding of plant-microbe interaction.
目前，由于高通量测序技术的发展，其具有更高的速度和产出投入比，基因组测序在研究实验室中得到了广泛应用。在这里，我们总结了基因组学在植物细菌病理系统的不同方面的应用。基因组学已被用于研究植物-细菌相互作用和宿主特异性的机制。它还有助于分类学、未培养细菌的研究、病原体鉴定、单细胞测序、群体遗传学和元转录组学。总的来说，基因组学极大地提高了我们对植物-微生物相互作用的理解。
