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通过分子对接模拟研究丹参酮和丹参中的丹酚酸 B 对 β-淀粉样前体蛋白水解酶 1(BACE1)的抑制作用的计算见解。

Computational insights into β-site amyloid precursor protein enzyme 1 (BACE1) inhibition by tanshinones and salvianolic acids from Salvia miltiorrhiza via molecular docking simulations.

机构信息

Department of Food and Life Science, Pukyong National University, Busan, 48513, Republic of Korea.

College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu, 41566, Republic of Korea.

出版信息

Comput Biol Chem. 2018 Jun;74:273-285. doi: 10.1016/j.compbiolchem.2018.04.008. Epub 2018 Apr 13.

Abstract

The rhizome of Salvia miltiorrhiza has emerged as a rich source of natural therapeutic agents, and its several compounds are supposed to exhibit favorable effects on Alzheimer's disease (AD). The present work investigate the anti-AD potentials of 12 tanshinones, three salvianolic acids and three caffeic acid derivatives from S. miltiorrhiza via the inhibition of β-site amyloid precursor protein cleaving enzyme 1 (BACE1). Among the tested compounds, deoxyneocryptotanshinone (1), salvianolic acid A (13) and salvianolic acid C (15) displayed good inhibitory effect on BACE1 with IC values of 11.53 ± 1.13, 13.01 ± 0.32 and 9.18 ± 0.03 μM, respectively. Besides this, enzyme kinetic analysis on BACE1 revealed 13, a competitive type inhibitor while 1 and 15 showed mixed-type inhibition. Furthermore, molecular docking simulation displayed negative binding energies (AutoDock 4.2.6 = -10.0 to -7.1 kcal/mol) of 1, 13, and 15 for BACE1, indicating these compounds bound tightly to the active site of the enzyme with low energy and high affinity. The results of the present study clearly demonstrate that S. miltiorrhiza and its constituents have potential anti-AD activity and can be used as a therapeutic agent for the treatment of AD.

摘要

丹参根茎已成为天然治疗药物的丰富来源,其几种化合物据称对阿尔茨海默病(AD)具有良好的作用。本研究通过抑制β-淀粉样前体蛋白裂解酶 1(BACE1),对丹参中的 12 种丹参酮、3 种丹酚酸和 3 种咖啡酸衍生物的抗 AD 潜力进行了研究。在测试的化合物中,去氧新隐丹参酮(1)、丹酚酸 A(13)和丹酚酸 C(15)对 BACE1 表现出良好的抑制作用,IC50 值分别为 11.53±1.13、13.01±0.32 和 9.18±0.03μM。此外,对 BACE1 的酶动力学分析表明,13 是一种竞争性抑制剂,而 1 和 15 则表现出混合抑制作用。此外,分子对接模拟显示 1、13 和 15 与 BACE1 的结合能为负(AutoDock 4.2.6=-10.0 至-7.1 kcal/mol),表明这些化合物与酶的活性部位结合紧密,具有低能量和高亲和力。本研究的结果清楚地表明,丹参及其成分具有潜在的抗 AD 活性,可作为治疗 AD 的治疗药物。

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