Li Zheng, Omidvar Noushin, Chin Wei Shan, Robb Esther, Morris Amanda, Achenie Luke, Xin Hongliang
Department of Chemical Engineering , Virginia Polytechnic Institute and State University , Blacksburg , Virginia 24061 , United States.
Department of Chemistry , Virginia Polytechnic Institute and State University , Blacksburg , Virginia 24061 , United States.
J Phys Chem A. 2018 May 10;122(18):4571-4578. doi: 10.1021/acs.jpca.8b02842. Epub 2018 Apr 27.
Molecular functionalization of porphyrins opens countless new opportunities in tailoring their physicochemical properties for light-harvesting applications. However, the immense materials space spanned by a vast number of substituent ligands and chelating metal ions prohibits high-throughput screening of combinatorial libraries. In this work, machine-learning algorithms equipped with the domain knowledge of chemical graph theory were employed for predicting the energy gaps of >12 000 porphyrins from the Computational Materials Repository. Among a variety of graph-based molecular descriptors, the electrotopological-state index, which encodes electronic and topological structure information, captures the energy gaps of porphyrins with a prediction RMSE < 0.06 eV. Importantly, feature sensitivity analysis suggests that the carbon structural motif in methine bridges connected to the anchor group predominantly influences the energy gaps of porphyrins, consistent with the spatial distribution of their frontier molecular orbitals from quantum-chemical calculations.
卟啉的分子功能化在为光捕获应用定制其物理化学性质方面开启了无数新机遇。然而,大量取代配体和螯合金属离子所跨越的巨大材料空间阻碍了组合库的高通量筛选。在这项工作中,配备化学图论领域知识的机器学习算法被用于预测来自计算材料库的12000多种卟啉的能隙。在各种基于图的分子描述符中,编码电子和拓扑结构信息的电拓扑状态指数能够以预测均方根误差<0.06 eV的精度捕获卟啉的能隙。重要的是,特征敏感性分析表明,与锚定基团相连的次甲基桥中的碳结构 motif 对卟啉的能隙有主要影响,这与量子化学计算中其前沿分子轨道的空间分布一致。