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前列腺癌基因组学:最新进展与少数族裔代表性不足的现状。

Prostate Cancer Genomics: Recent Advances and the Prevailing Underrepresentation from Racial and Ethnic Minorities.

机构信息

Center for Prostate Disease Research, Department of Surgery, Uniformed Services University of the Health Sciences and the Walter Reed National Military Medical Center, Rockville, MD 20852, USA.

出版信息

Int J Mol Sci. 2018 Apr 22;19(4):1255. doi: 10.3390/ijms19041255.

Abstract

Prostate cancer (CaP) is the most commonly diagnosed non-cutaneous cancer and the second leading cause of male cancer deaths in the United States. Among African American (AA) men, CaP is the most prevalent malignancy, with disproportionately higher incidence and mortality rates. Even after discounting the influence of socioeconomic factors, the effect of molecular and genetic factors on racial disparity of CaP is evident. Earlier studies on the molecular basis for CaP disparity have focused on the influence of heritable mutations and single-nucleotide polymorphisms (SNPs). Most CaP susceptibility alleles identified based on genome-wide association studies (GWAS) were common, low-penetrance variants. Germline CaP-associated mutations that are highly penetrant, such as those found in and , are usually rare. More recently, genomic studies enabled by Next-Gen Sequencing (NGS) technologies have focused on the identification of somatic mutations that contribute to CaP tumorigenesis. These studies confirmed the high prevalence of gene fusions and deletions among Caucasian Americans and identified novel somatic alterations in and genes in early stages of CaP. Individuals with African ancestry and other minorities are often underrepresented in these large-scale genomic studies, which are performed primarily using tumors from men of European ancestry. The insufficient number of specimens from AA men and other minority populations, together with the heterogeneity in the molecular etiology of CaP across populations, challenge the generalizability of findings from these projects. Efforts to close this gap by sequencing larger numbers of tumor specimens from more diverse populations, although still at an early stage, have discovered distinct genomic alterations. These research findings can have a direct impact on the diagnosis of CaP, the stratification of patients for treatment, and can help to address the disparity in incidence and mortality of CaP. This review examines the progress of understanding in CaP genetics and genomics and highlight the need to increase the representation from minority populations.

摘要

前列腺癌(CaP)是美国最常见的非皮肤癌,也是男性癌症死亡的第二大主要原因。在美国,非裔美国人(AA)男性中,CaP 是最常见的恶性肿瘤,其发病率和死亡率都不成比例地更高。即使不计入社会经济因素的影响,分子和遗传因素对 CaP 种族差异的影响也是显而易见的。早期关于 CaP 差异的分子基础的研究集中在遗传突变和单核苷酸多态性(SNP)的影响上。大多数基于全基因组关联研究(GWAS)确定的 CaP 易感性等位基因是常见的、低外显率的变体。具有高外显率的种系 CaP 相关突变,如在 和 中发现的突变,通常很少见。最近,下一代测序(NGS)技术的基因组研究侧重于鉴定导致 CaP 肿瘤发生的体细胞突变。这些研究证实了 基因融合和 缺失在白种人中的高发生率,并在 CaP 的早期阶段鉴定了 基因和 基因中的新的体细胞改变。具有非洲血统和其他少数族裔的个体在这些大规模基因组研究中经常代表性不足,这些研究主要使用来自欧洲裔祖先的男性的肿瘤进行。来自非裔美国人和其他少数族裔的标本数量不足,以及不同人群中 CaP 的分子病因学的异质性,这对这些项目的研究结果的普遍性构成了挑战。通过对来自更多样化人群的大量肿瘤标本进行测序来缩小这一差距的努力,尽管仍处于早期阶段,但已经发现了不同的基因组改变。这些研究结果可以直接影响 CaP 的诊断、患者的治疗分层,并有助于解决 CaP 的发病率和死亡率的差异。本文回顾了对 CaP 遗传学和基因组学的理解进展,并强调需要增加少数族裔人群的代表性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4dde/5979433/01251f01ccf6/ijms-19-01255-g001.jpg

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