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多发性骨髓瘤风险等位基因 5q15 降低 ELL2 的表达并增加核糖体基因的表达。

The multiple myeloma risk allele at 5q15 lowers ELL2 expression and increases ribosomal gene expression.

机构信息

Department of Laboratory Medicine, Hematology and Transfusion Medicine, SE 221 84, Lund, Sweden.

Myeloma Institute for Research and Therapy, University of Arkansas for Medical Sciences, Little Rock, AR, 72205, USA.

出版信息

Nat Commun. 2018 Apr 25;9(1):1649. doi: 10.1038/s41467-018-04082-2.

Abstract

Recently, we identified ELL2 as a susceptibility gene for multiple myeloma (MM). To understand its mechanism of action, we performed expression quantitative trait locus analysis in CD138 plasma cells from 1630 MM patients from four populations. We show that the MM risk allele lowers ELL2 expression in these cells (P = 2.5 × 10; β = -0.24 SD), but not in peripheral blood or other tissues. Consistent with this, several variants representing the MM risk allele map to regulatory genomic regions, and three yield reduced transcriptional activity in plasmocytoma cell lines. One of these (rs3777189-C) co-locates with the best-supported lead variants for ELL2 expression and MM risk, and reduces binding of MAFF/G/K family transcription factors. Moreover, further analysis reveals that the MM risk allele associates with upregulation of gene sets related to ribosome biogenesis, and knockout/knockdown and rescue experiments in plasmocytoma cell lines support a cause-effect relationship. Our results provide mechanistic insight into MM predisposition.

摘要

最近,我们鉴定出 ELL2 是多发性骨髓瘤(MM)的易感基因。为了了解其作用机制,我们对来自四个群体的 1630 名 MM 患者的 CD138 浆细胞进行了表达数量性状基因座分析。结果表明,MM 的风险等位基因降低了这些细胞中的 ELL2 表达(P=2.5×10-16;β=-0.24 SD),但在外周血或其他组织中没有。与此一致的是,代表 MM 风险等位基因的几个变体映射到调节基因组区域,并且三个变体在浆细胞瘤系中产生降低的转录活性。其中一个(rs3777189-C)与 ELL2 表达和 MM 风险的最佳支持先导变体共定位,并降低了 MAFF/G/K 家族转录因子的结合。此外,进一步的分析表明,MM 的风险等位基因与核糖体生物发生相关基因集的上调相关,浆细胞瘤系中的敲除/敲低和挽救实验支持因果关系。我们的研究结果为 MM 的易感性提供了机制上的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/19af/5917026/d7e219a80481/41467_2018_4082_Fig1_HTML.jpg

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