a Department of Biochemistry and Immunology, Institute of Biological Sciences , Federal University of Minas Gerais , Belo Horizonte , Brazil.
b Department of Physical and Biological Sciences , Federal University of São João del Rei , Sete Lagoas , Brazil.
J Biomol Struct Dyn. 2019 Apr;37(7):1843-1856. doi: 10.1080/07391102.2018.1470036. Epub 2018 May 17.
Galantamine (Gnt) is a natural alkaloid inhibitor of acetylcholinesterase and is presently one of the most used drugs in the treatment against Alzheimer's disease during both the initial and intermediate stages. Among several natural Gnt derivatives, sanguinine (Sng) and lycoramine (Lyc) attract attention because of the way their subtle chemical differences from Gnt lead to drastic and opposite distinctions in inhibitory effects. However, to date, there is no solved structure for these natural derivatives. In the present study, we applied computational modeling and free energy calculation methods to better elucidate the molecular basis of the subtle distinctions between these derivatives and Gnt. The results showed that differences in the mobility of the non-aromatic ring carried by the Lyc-like sp-sp modification display drastic conformational, vibrational, and entropic penalties at binding compared to Gnt. Additionally, the establishment of a stronger hydrogen bond network added enthalpic advantages for the linkage of the Sng-like methoxy-hydroxy substituted ligands. These results, which suggest an affinity ranking in agreement with that found in the literature, provided insights that are helpful for future planning and development of new anti-Alzheimer's disease drugs.
加兰他敏(Gnt)是一种天然生物碱乙酰胆碱酯酶抑制剂,目前是治疗阿尔茨海默病初始和中期阶段最常用的药物之一。在几种天然 Gnt 衍生物中,桑辛碱(Sng)和石蒜碱(Lyc)引起了人们的关注,因为它们与 Gnt 的细微化学差异导致抑制作用产生了巨大而相反的区别。然而,迄今为止,这些天然衍生物的结构尚未解决。在本研究中,我们应用计算建模和自由能计算方法来更好地阐明这些衍生物与 Gnt 之间细微区别的分子基础。结果表明,与 Gnt 相比,Lyc 样 sp-sp 修饰所携带的非芳环的迁移率差异在结合时表现出剧烈的构象、振动和熵罚。此外,建立更强的氢键网络为 Sng 样甲氧基-羟基取代配体的连接增加了焓优势。这些结果表明与文献中发现的亲和力排序一致,为未来规划和开发新的抗阿尔茨海默病药物提供了有帮助的见解。