Department of Internal Medicine, Faculty of Medical Sciences, University of Campinas, Campinas, Sao Paulo, Brazil.
Brazilian Biosciences National Laboratory, Campinas, Brazil.
PLoS One. 2018 Apr 26;13(4):e0196426. doi: 10.1371/journal.pone.0196426. eCollection 2018.
From 2006 to 2013, an increasing incidence of fusariosis was observed in the hematologic patients of our University Hospital. We suspected of an environmental source, and the indoor hospital air was investigated as a potential source of the fungemia. Air samplings were performed in the hematology and bone marrow transplant (BMT) wards using an air sampler with pre-defined air volumes. To study the molecular relationship among environmental and clinical isolates, 18 Fusarium spp. recovered from blood cultures were included in the study. DNA sequencing of a partial portion of TEF1α gene was performed for molecular identification. Molecular typing was carried out by multi-locus sequence typing (MLST) using a four-gene scheme: TEF1α, rDNA, RPB1 and RPB2. One hundred four isolates were recovered from the air of the hematology (n = 76) and the BMT (n = 28) wards. Fusarium isolates from the air were from five species complexes: Fusarium fujikuroi (FFSC, n = 56), Fusarium incarnatum-equiseti (FIESC, n = 24), Fusarium solani (FSSC, n = 13), Fusarium chlamydosporum (FCSC, n = 10), and Fusarium oxysporum (FOSC, n = 1). Fifteen Fusarium isolates recovered from blood belonged to FSSC, and three to FFSC. MLST identified the same sequence type (ST) in clinical and environmental isolates. ST1 was found in 5 isolates from blood and in 7 from the air, both identified as FSSC (Fusarium petroliphilum). STn1 was found in one isolate from blood and in one from the air, both identified as FFSC (Fusarium napiforme). F. napiforme was isolated from the air of the hospital room of the patient with fungemia due to F. napiforme. These findings suggested a possible clonal origin of the Fusarium spp. recovered from air and bloodcultures. In conclusion, our study found a diversity of Fusarium species in the air of our hospital, and a possible role of the air as source of systemic fusariosis in our immunocompromised patients.
从 2006 年到 2013 年,我们医院的血液科患者中 Fusariosis 的发病率不断上升。我们怀疑这是一种环境来源,因此调查了室内医院空气是否是真菌血症的潜在来源。使用预定义空气量的空气采样器在血液科和骨髓移植 (BMT) 病房进行空气采样。为了研究环境和临床分离株之间的分子关系,从血液培养物中回收了 18 种 Fusarium spp. 进行了研究。通过 TEF1α 基因的部分序列进行了 DNA 测序,进行了分子鉴定。使用 TEF1α、rDNA、RPB1 和 RPB2 的四基因方案进行了多基因座序列分型 (MLST),进行了分子分型。从血液科 (n = 76) 和 BMT (n = 28) 病房的空气中回收了 104 株 Fusarium 分离株。来自空气的 Fusarium 分离株来自五个物种复合体:Fusarium fujikuroi (FFSC,n = 56)、Fusarium incarnatum-equiseti (FIESC,n = 24)、Fusarium solani (FSSC,n = 13)、Fusarium chlamydosporum (FCSC,n = 10)和 Fusarium oxysporum (FOSC,n = 1)。从血液中回收的 15 株 Fusarium 分离株属于 FSSC,3 株属于 FFSC。MLST 在临床和环境分离株中鉴定出相同的序列型 (ST)。ST1 发现于 5 株血液分离株和 7 株空气分离株中,均鉴定为 FSSC(Petrophilum petroliphilum)。STn1 发现于一株血液分离株和一株空气分离株中,均鉴定为 FFSC(Napiforme fusarium)。F. napiforme 从真菌血症患者的医院病房空气中分离出来。这些发现表明,从空气和血液培养物中回收的 Fusarium spp. 可能具有克隆起源。总之,我们的研究发现,我们医院空气中存在多种 Fusarium 物种,空气可能是我们免疫功能低下患者系统性 Fusariosis 的来源。