• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用多重连接依赖探针扩增技术对多民族群体进行SULT1A1基因拷贝数分析。

Multi-ethnic SULT1A1 copy number profiling with multiplex ligation-dependent probe amplification.

作者信息

Vijzelaar Raymon, Botton Mariana R, Stolk Lisette, Martis Suparna, Desnick Robert J, Scott Stuart A

机构信息

MRC-Holland, Willem Schoutenstraat 1, Amsterdam, The Netherlands.

Department of Genetics & Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

出版信息

Pharmacogenomics. 2018 Jun 1;19(9):761-770. doi: 10.2217/pgs-2018-0047. Epub 2018 May 23.

DOI:10.2217/pgs-2018-0047
PMID:29790428
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6021911/
Abstract

AIM

To develop a SULT1A1 multiplex ligation-dependent probe amplification assay and to investigate multi-ethnic copy number variant frequencies.

METHODS

A novel multiplex ligation-dependent probe amplification assay was developed and tested on 472 African-American, Asian, Caucasian, Hispanic and Ashkenazi Jewish individuals.

RESULTS

The frequencies of atypical total copy number (i.e., greater or less than two) were 38.7% for Hispanics, 38.9% for Ashkenazi Jewish, 43.2% for Caucasians, 53.6% for Asians and 64.1% for African-Americans. Heterozygous SULT1A1 deletion carriers (slow sulfators) were most common among Caucasians (8.4%), whereas African-Americans had the highest frequencies of three or more copies (rapid sulfators; 60.9%).

CONCLUSION

Different ethnic and racial populations have varying degrees of SULT1A1-mediated sulfation activity, which warrants further research and that may have utility for drug response prediction among SULT1A1-metabolized medications.

摘要

目的

开发一种SULT1A1多重连接依赖探针扩增检测方法,并研究多种族的拷贝数变异频率。

方法

开发了一种新型多重连接依赖探针扩增检测方法,并在472名非裔美国人、亚洲人、高加索人、西班牙裔和德系犹太人个体上进行了测试。

结果

西班牙裔非典型总拷贝数(即大于或小于两个)的频率为38.7%,德系犹太人中为38.9%,高加索人为43.2%,亚洲人为53.6%,非裔美国人为64.1%。杂合性SULT1A1缺失携带者(慢硫酸化者)在高加索人中最为常见(8.4%),而非裔美国人中三个或更多拷贝(快硫酸化者)的频率最高(60.9%)。

结论

不同种族和民族人群的SULT1A1介导的硫酸化活性程度不同,这值得进一步研究,并且可能有助于预测SULT1A1代谢药物的药物反应。

相似文献

1
Multi-ethnic SULT1A1 copy number profiling with multiplex ligation-dependent probe amplification.利用多重连接依赖探针扩增技术对多民族群体进行SULT1A1基因拷贝数分析。
Pharmacogenomics. 2018 Jun 1;19(9):761-770. doi: 10.2217/pgs-2018-0047. Epub 2018 May 23.
2
CYP2D6, SULT1A1 and UGT2B17 copy number variation: quantitative detection by multiplex PCR.CYP2D6、SULT1A1 和 UGT2B17 拷贝数变异:多重 PCR 的定量检测。
Pharmacogenomics. 2012 Jan;13(1):91-111. doi: 10.2217/pgs.11.135. Epub 2011 Nov 23.
3
Integrated CYP2D6 interrogation for multiethnic copy number and tandem allele detection.用于多种族拷贝数和串联等位基因检测的 CYP2D6 综合检测。
Pharmacogenomics. 2019 Jan;20(1):9-20. doi: 10.2217/pgs-2018-0135. Epub 2018 Dec 6.
4
SULT1A1 copy number variation: ethnic distribution analysis in an Indian population.SULT1A1基因拷贝数变异:印度人群的种族分布分析
Ann Hum Biol. 2017 Nov;44(7):663-666. doi: 10.1080/03014460.2017.1376852. Epub 2017 Sep 24.
5
Multi-ethnic cytochrome-P450 copy number profiling: novel pharmacogenetic alleles and mechanism of copy number variation formation.多民族细胞色素 P450 拷贝数分析:新型药物遗传学等位基因和拷贝数变异形成机制。
Pharmacogenomics J. 2013 Dec;13(6):558-66. doi: 10.1038/tpj.2012.48. Epub 2012 Nov 20.
6
Genotyping Multiallelic Copy Number Variation with Multiplex Ligation-Dependent Probe Amplification (MLPA).使用多重连接依赖探针扩增技术(MLPA)对多等位基因拷贝数变异进行基因分型。
Methods Mol Biol. 2017;1492:147-153. doi: 10.1007/978-1-4939-6442-0_9.
7
Sulfation pharmacogenetics: SULT1A1 and SULT1A2 allele frequencies in Caucasian, Chinese and African-American subjects.硫酸化药物遗传学:白种人、中国人和非裔美国人中SULT1A1和SULT1A2等位基因频率
Pharmacogenetics. 2001 Feb;11(1):57-68. doi: 10.1097/00008571-200102000-00007.
8
Human SULT1A1 gene: copy number differences and functional implications.人类SULT1A1基因:拷贝数差异及其功能意义。
Hum Mol Genet. 2007 Mar 1;16(5):463-70. doi: 10.1093/hmg/ddl468. Epub 2006 Dec 22.
9
Copy number variation and gene rearrangements in CYP2D6 genotyping using multiplex ligation-dependent probe amplification in Koreans.采用多重连接依赖探针扩增技术对韩国人群 CYP2D6 基因进行基因分型的拷贝数变异和基因重排研究。
Pharmacogenomics. 2012 Jun;13(8):963-73. doi: 10.2217/pgs.12.58.
10
MLPA-based approach for initial and simultaneous detection of GBA deletions and recombinant alleles in patients affected by Gaucher Disease.基于多重连接探针扩增技术的方法,用于初始及同时检测戈谢病患者中GBA基因缺失和重组等位基因。
Mol Genet Metab. 2016 Dec;119(4):329-337. doi: 10.1016/j.ymgme.2016.10.008. Epub 2016 Oct 27.

引用本文的文献

1
Sulphotransferase-mediated toxification of chemicals in mouse models: effect of knockout or humanisation of SULT genes.硫酸转移酶介导的化学物质在小鼠模型中的毒性作用:SULT基因敲除或人源化的影响
Essays Biochem. 2024 Dec 4;68(4):523-539. doi: 10.1042/EBC20240030.
2
Copy number variations of cytochrome genes in Kinh Vietnamese.京族越南人中细胞色素基因的拷贝数变异
Asian Biomed (Res Rev News). 2023 Sep 17;17(2):84-92. doi: 10.2478/abm-2023-0048. eCollection 2023 Apr.
3
Structural variation of the coding and non-coding human pharmacogenome.人类编码和非编码药物基因组的结构变异
NPJ Genom Med. 2023 Sep 8;8(1):24. doi: 10.1038/s41525-023-00371-y.
4
Population Pharmacokinetics of Z-Endoxifen in Patients With Advanced Solid Tumors.晚期实体瘤患者 Z-ENDOXIFEN 的群体药代动力学。
J Clin Pharmacol. 2022 Sep;62(9):1121-1131. doi: 10.1002/jcph.2053. Epub 2022 Apr 19.
5
Simple and Robust Detection of Gene Deletions and Duplications Using as Reference.使用 作为参考进行基因缺失和重复的简单且稳健的检测。 (你提供的原文中“using”后面似乎缺少具体内容)
Pharmaceuticals (Basel). 2022 Jan 28;15(2):166. doi: 10.3390/ph15020166.
6
Combination of Genome-Wide Polymorphisms and Copy Number Variations of Pharmacogenes in Koreans.韩国人群中药物代谢基因的全基因组多态性与拷贝数变异的联合研究
J Pers Med. 2021 Jan 7;11(1):33. doi: 10.3390/jpm11010033.
7
Sulfation pathways from red to green.从红色到绿色的硫酸化途径。
J Biol Chem. 2019 Aug 16;294(33):12293-12312. doi: 10.1074/jbc.REV119.007422. Epub 2019 Jul 2.
8
Structural variation at the CYP2C locus: Characterization of deletion and duplication alleles.CYP2C 基因座的结构变异:缺失和重复等位基因的特征。
Hum Mutat. 2019 Nov;40(11):e37-e51. doi: 10.1002/humu.23855.

本文引用的文献

1
An integrated map of structural variation in 2,504 human genomes.2504个人类基因组结构变异的整合图谱。
Nature. 2015 Oct 1;526(7571):75-81. doi: 10.1038/nature15394.
2
Risk of Misdiagnosis Due to Allele Dropout and False-Positive PCR Artifacts in Molecular Diagnostics: Analysis of 30,769 Genotypes.分子诊断中由于等位基因脱扣和假阳性PCR产物导致的误诊风险:30769个基因型的分析
J Mol Diagn. 2015 Sep;17(5):505-14. doi: 10.1016/j.jmoldx.2015.04.004. Epub 2015 Jul 3.
3
A decade of structural variants: description, history and methods to detect structural variation.结构变异的十年:结构变异的描述、历史及检测方法
Brief Funct Genomics. 2015 Sep;14(5):305-14. doi: 10.1093/bfgp/elv014. Epub 2015 Apr 15.
4
SULT2A1 Gene Copy Number Variation is Associated with Urinary Excretion Rate of Steroid Sulfates.SULT2A1 基因拷贝数变异与类固醇硫酸酯的尿排泄率有关。
Front Endocrinol (Lausanne). 2013 Jul 12;4:88. doi: 10.3389/fendo.2013.00088. eCollection 2013.
5
The Genotype-Tissue Expression (GTEx) project.基因型-组织表达 (GTEx) 项目。
Nat Genet. 2013 Jun;45(6):580-5. doi: 10.1038/ng.2653.
6
Copy number variation in sulfotransferase isoform 1A1 (SULT1A1) is significantly associated with enzymatic activity in Japanese subjects.硫酸转移酶同工酶1A1(SULT1A1)的拷贝数变异与日本受试者的酶活性显著相关。
Pharmgenomics Pers Med. 2013;6:19-24. doi: 10.2147/PGPM.S36579. Epub 2013 Mar 6.
7
Multi-ethnic cytochrome-P450 copy number profiling: novel pharmacogenetic alleles and mechanism of copy number variation formation.多民族细胞色素 P450 拷贝数分析:新型药物遗传学等位基因和拷贝数变异形成机制。
Pharmacogenomics J. 2013 Dec;13(6):558-66. doi: 10.1038/tpj.2012.48. Epub 2012 Nov 20.
8
A maximum-likelihood method to correct for allelic dropout in microsatellite data with no replicate genotypes.一种无重复基因型的微卫星数据等位基因缺失校正的最大似然法。
Genetics. 2012 Oct;192(2):651-69. doi: 10.1534/genetics.112.139519. Epub 2012 Jul 30.
9
Evolution and functional impact of rare coding variation from deep sequencing of human exomes.人类外显子组深度测序中罕见编码变异的进化和功能影响。
Science. 2012 Jul 6;337(6090):64-9. doi: 10.1126/science.1219240. Epub 2012 May 17.
10
SULT1A1, CYP2C19 and disease-free survival in early breast cancer patients receiving tamoxifen.SULT1A1、CYP2C19 与接受他莫昔芬治疗的早期乳腺癌患者的无病生存。
Pharmacogenomics. 2011 Nov;12(11):1535-43. doi: 10.2217/pgs.11.97. Epub 2011 Oct 3.