Hattersley Neil, Lara-Gonzalez Pablo, Cheerambathur Dhanya, Gomez-Cavazos J Sebastian, Kim Taekyung, Prevo Bram, Khaliullin Renat, Lee Kian-Yong, Ohta Midori, Green Rebecca, Oegema Karen, Desai Arshad
Ludwig Institute for Cancer Research, La Jolla, CA, United States; Department of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, United States.
Ludwig Institute for Cancer Research, La Jolla, CA, United States; Department of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, United States.
Methods Cell Biol. 2018;144:185-231. doi: 10.1016/bs.mcb.2018.03.008. Epub 2018 May 1.
The one-cell Caenorhabditis elegans embryo offers many advantages for mechanistic analysis of cell division processes. Conservation of key genes and pathways involved in cell division makes findings in C. elegans broadly relevant. A key technical advantage of this system is the ability to penetrantly deplete essential gene products by RNA interference (RNAi) and replace them with wild-type or mutant versions expressed at endogenous levels from single copy RNAi-resistant transgene insertions. This ability to precisely perturb essential genes is complemented by the inherently highly reproducible nature of the zygotic division that facilitates development of quantitative imaging assays. Here, we detail approaches to generate targeted single copy transgene insertions that are RNAi-resistant, to engineer variants of individual genes employing transgene insertions as well as at the endogenous locus, and to in situ tag genes with fluorophores/purification tags. We also describe imaging assays and common image analysis tools employed to quantitatively monitor phenotypic effects of specific perturbations on meiotic and mitotic chromosome segregation, centrosome assembly/function, and cortical dynamics/cytokinesis.
单细胞秀丽隐杆线虫胚胎为细胞分裂过程的机制分析提供了许多优势。参与细胞分裂的关键基因和途径的保守性使得在秀丽隐杆线虫中的发现具有广泛的相关性。该系统的一个关键技术优势是能够通过RNA干扰(RNAi)深入耗尽必需基因产物,并用从单拷贝RNAi抗性转基因插入物以内源水平表达的野生型或突变型版本取代它们。精确干扰必需基因的这种能力与合子分裂固有的高度可重复性相结合,这有助于开发定量成像分析。在这里,我们详细介绍了生成抗RNAi的靶向单拷贝转基因插入物的方法,利用转基因插入物以及在内源基因座上改造单个基因的变体,以及用荧光团/纯化标签原位标记基因。我们还描述了用于定量监测特定扰动对减数分裂和有丝分裂染色体分离、中心体组装/功能以及皮质动力学/胞质分裂的表型影响的成像分析和常用图像分析工具。