• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过对重编码细菌菌株的实验室进化实现定制硒蛋白的生产。

Custom selenoprotein production enabled by laboratory evolution of recoded bacterial strains.

机构信息

Center for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, USA.

Department of Chemistry, University of Texas at Austin, Austin, Texas, USA.

出版信息

Nat Biotechnol. 2018 Aug;36(7):624-631. doi: 10.1038/nbt.4154. Epub 2018 Jun 4.

DOI:10.1038/nbt.4154
PMID:29863724
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6035053/
Abstract

Incorporation of the rare amino acid selenocysteine to form diselenide bonds can improve stability and function of synthetic peptide therapeutics. However, application of this approach to recombinant proteins has been hampered by heterogeneous incorporation, low selenoprotein yields, and poor fitness of bacterial producer strains. We report the evolution of recoded Escherichia coli strains with improved fitness that are superior hosts for recombinant selenoprotein production. We apply an engineered β-lactamase containing an essential diselenide bond to enforce selenocysteine dependence during continuous evolution of recoded E. coli strains. Evolved strains maintain an expanded genetic code indefinitely. We engineer a fluorescent reporter to quantify selenocysteine incorporation in vivo and show complete decoding of UAG codons as selenocysteine. Replacement of native, labile disulfide bonds in antibody fragments with diselenide bonds vastly improves resistance to reducing conditions. Highly seleno-competent bacterial strains enable industrial-scale selenoprotein expression and unique diselenide architecture, advancing our ability to customize the selenoproteome.

摘要

将稀有氨基酸硒代半胱氨酸掺入形成二硒键可以提高合成肽治疗剂的稳定性和功能。然而,这种方法在重组蛋白中的应用受到异质掺入、低硒蛋白产量和细菌生产菌株适应性差的阻碍。我们报告了经过改良的、适应性更好的重组硒蛋白生产的大肠杆菌菌株的进化。我们应用一种含有必需二硒键的工程化β-内酰胺酶,在连续进化的重组大肠杆菌菌株中强制依赖硒代半胱氨酸。进化后的菌株可以无限期地维持扩展的遗传密码。我们设计了一种荧光报告基因来定量体内硒代半胱氨酸的掺入,并表明 UAG 密码子完全被解码为硒代半胱氨酸。用二硒键替换抗体片段中原有的不稳定二硫键可大大提高其对还原条件的抗性。高度适应硒的细菌菌株能够实现工业规模的硒蛋白表达和独特的二硒键结构,提高了我们定制硒蛋白组的能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/10ea307328da/nihms954410f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/b80683e52a45/nihms954410f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/c1d5bd5ddf3a/nihms954410f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/8b1df1feb216/nihms954410f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/57eefe203054/nihms954410f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/10ea307328da/nihms954410f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/b80683e52a45/nihms954410f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/c1d5bd5ddf3a/nihms954410f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/8b1df1feb216/nihms954410f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/57eefe203054/nihms954410f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5984/6035053/10ea307328da/nihms954410f5.jpg

相似文献

1
Custom selenoprotein production enabled by laboratory evolution of recoded bacterial strains.通过对重编码细菌菌株的实验室进化实现定制硒蛋白的生产。
Nat Biotechnol. 2018 Aug;36(7):624-631. doi: 10.1038/nbt.4154. Epub 2018 Jun 4.
2
Introducing Selenocysteine into Recombinant Proteins in Escherichia coli.在大肠杆菌中引入硒代半胱氨酸到重组蛋白中。
Curr Protoc. 2021 Feb;1(2):e54. doi: 10.1002/cpz1.54.
3
Chemical Biology Approaches to Interrogate the Selenoproteome.化学生物学方法探究硒蛋白组。
Acc Chem Res. 2019 Oct 15;52(10):2832-2840. doi: 10.1021/acs.accounts.9b00379. Epub 2019 Sep 16.
4
Processive selenocysteine incorporation during synthesis of eukaryotic selenoproteins.真核生物硒蛋白合成过程中的连续硒半胱氨酸掺入。
J Mol Biol. 2010 Jun 11;399(3):385-96. doi: 10.1016/j.jmb.2010.04.033. Epub 2010 Apr 24.
5
High-level expression in Escherichia coli of selenocysteine-containing rat thioredoxin reductase utilizing gene fusions with engineered bacterial-type SECIS elements and co-expression with the selA, selB and selC genes.利用与工程化细菌型硒代半胱氨酸插入序列元件的基因融合以及与selA、selB和selC基因共表达,在大肠杆菌中实现含硒代半胱氨酸的大鼠硫氧还蛋白还原酶的高水平表达。
J Mol Biol. 1999 Oct 8;292(5):1003-16. doi: 10.1006/jmbi.1999.3085.
6
Site-Specific Selenocysteine Incorporation into Proteins by Genetic Engineering.通过基因工程将位点特异性硒代半胱氨酸掺入蛋白质中。
Chembiochem. 2021 Oct 13;22(20):2918-2924. doi: 10.1002/cbic.202100124. Epub 2021 Jun 25.
7
Expressing recombinant selenoproteins using redefinition of a single UAG codon in an RF1-depleted E. coli host strain.在缺乏RF1的大肠杆菌宿主菌株中通过重新定义单个UAG密码子来表达重组硒蛋白。
Methods Enzymol. 2022;662:95-118. doi: 10.1016/bs.mie.2021.10.004. Epub 2021 Nov 15.
8
Expression of selenoproteins via genetic code expansion in mammalian cells.通过在哺乳动物细胞中的遗传密码扩展表达硒蛋白。
Methods Enzymol. 2022;662:143-158. doi: 10.1016/bs.mie.2021.10.015. Epub 2021 Nov 24.
9
Dynamic evolution of selenocysteine utilization in bacteria: a balance between selenoprotein loss and evolution of selenocysteine from redox active cysteine residues.细菌中硒代半胱氨酸利用的动态演变:硒蛋白丧失与氧化还原活性半胱氨酸残基向硒代半胱氨酸演变之间的平衡。
Genome Biol. 2006;7(10):R94. doi: 10.1186/gb-2006-7-10-r94. Epub 2006 Oct 20.
10
Generation of Recombinant Mammalian Selenoproteins through Genetic Code Expansion with Photocaged Selenocysteine.通过光笼硒代半胱氨酸的遗传密码扩展生成重组哺乳动物硒蛋白。
ACS Chem Biol. 2020 Jun 19;15(6):1535-1540. doi: 10.1021/acschembio.0c00147. Epub 2020 May 5.

引用本文的文献

1
Non-standard amino acid incorporation into thiol dioxygenases.非标准氨基酸掺入硫醇双加氧酶。
Methods Enzymol. 2024;703:121-145. doi: 10.1016/bs.mie.2024.05.022. Epub 2024 Jun 15.
2
Robust genetic codes enhance protein evolvability.稳健的遗传密码增强了蛋白质的可进化性。
PLoS Biol. 2024 May 16;22(5):e3002594. doi: 10.1371/journal.pbio.3002594. eCollection 2024 May.
3
Selenium chemistry for spatio-selective peptide and protein functionalization.硒化学用于空间选择性肽和蛋白质功能化。

本文引用的文献

1
Adaptive evolution of genomically recoded .基因组重编码噬菌体的适应性进化。
Proc Natl Acad Sci U S A. 2018 Mar 20;115(12):3090-3095. doi: 10.1073/pnas.1715530115. Epub 2018 Feb 13.
2
Efficient Expression of Glutathione Peroxidase with Chimeric tRNA in Amber-less Escherichia coli.在无琥珀突变大肠杆菌中利用嵌合tRNA高效表达谷胱甘肽过氧化物酶
ACS Synth Biol. 2018 Jan 19;7(1):249-257. doi: 10.1021/acssynbio.7b00290. Epub 2017 Sep 12.
3
Characterization of a selenocysteine-ligated P450 compound I reveals direct link between electron donation and reactivity.
Nat Rev Chem. 2024 Mar;8(3):211-229. doi: 10.1038/s41570-024-00579-1. Epub 2024 Feb 22.
4
Selective and Site-Specific Incorporation of Nonstandard Amino Acids Within Proteins for Therapeutic Applications.用于治疗应用的蛋白质中非常规氨基酸的选择性和特异性整合。
Methods Mol Biol. 2024;2720:35-53. doi: 10.1007/978-1-0716-3469-1_3.
5
Selenoproteins and tRNA-Sec: regulators of cancer redox homeostasis.硒蛋白和 tRNA-Sec:癌症氧化还原平衡的调节剂。
Trends Cancer. 2023 Dec;9(12):1006-1018. doi: 10.1016/j.trecan.2023.08.003. Epub 2023 Sep 15.
6
Recoding UAG to selenocysteine in .在. 中重编码 UAG 为硒代半胱氨酸。
RNA. 2023 Sep;29(9):1400-1410. doi: 10.1261/rna.079658.123. Epub 2023 Jun 6.
7
Creating Selenocysteine-Specific Reporters Using Inteins.利用内含肽创建硒半胱氨酸特异性报告基因
Methods Mol Biol. 2023;2676:69-86. doi: 10.1007/978-1-0716-3251-2_5.
8
Site-selective photocatalytic functionalization of peptides and proteins at selenocysteine.硒代半胱氨酸选择性光催化肽和蛋白质功能化。
Nat Commun. 2022 Nov 12;13(1):6885. doi: 10.1038/s41467-022-34530-z.
9
Recent progress in adaptive laboratory evolution of industrial microorganisms.工业微生物自适应实验室进化的最新进展。
J Ind Microbiol Biotechnol. 2023 Feb 17;50(1). doi: 10.1093/jimb/kuac023.
10
Delivery of the selenoprotein thioredoxin reductase 1 to mammalian cells.硒蛋白硫氧还蛋白还原酶1向哺乳动物细胞的递送。
Front Mol Biosci. 2022 Oct 11;9:1031756. doi: 10.3389/fmolb.2022.1031756. eCollection 2022.
硒半胱氨酸结合的 P450 化合物 I 的特性揭示了电子供体与反应性之间的直接联系。
Nat Chem. 2017 Jul;9(7):623-628. doi: 10.1038/nchem.2781. Epub 2017 May 29.
4
Optimizing complex phenotypes through model-guided multiplex genome engineering.通过模型引导的多重基因组工程优化复杂表型。
Genome Biol. 2017 May 25;18(1):100. doi: 10.1186/s13059-017-1217-z.
5
Accessing human selenoproteins through chemical protein synthesis.通过化学蛋白质合成获取人类硒蛋白。
Chem Sci. 2017 Mar 1;8(3):1922-1926. doi: 10.1039/c6sc04123j. Epub 2016 Nov 1.
6
Preparation of Selenoinsulin as a Long-Lasting Insulin Analogue.硒胰岛素的制备作为一种长效胰岛素类似物。
Angew Chem Int Ed Engl. 2017 May 8;56(20):5522-5526. doi: 10.1002/anie.201701654. Epub 2017 Apr 10.
7
Global analysis of translation termination in E. coli.大肠杆菌中翻译终止的全局分析。
PLoS Genet. 2017 Mar 16;13(3):e1006676. doi: 10.1371/journal.pgen.1006676. eCollection 2017 Mar.
8
Selenocysteine Insertion at a Predefined UAG Codon in a Release Factor 1 (RF1)-depleted Host Strain Bypasses Species Barriers in Recombinant Selenoprotein Translation.在缺乏释放因子1(RF1)的宿主菌株中,在预定义的UAG密码子处插入硒代半胱氨酸可在重组硒蛋白翻译中跨越物种障碍。
J Biol Chem. 2017 Mar 31;292(13):5476-5487. doi: 10.1074/jbc.M117.776310. Epub 2017 Feb 13.
9
A far-red fluorescent protein evolved from a cyanobacterial phycobiliprotein.一种从蓝藻藻胆蛋白进化而来的远红荧光蛋白。
Nat Methods. 2016 Sep;13(9):763-9. doi: 10.1038/nmeth.3935. Epub 2016 Aug 1.
10
Systematic screening of soluble expression of antibody fragments in the cytoplasm of E. coli.对大肠杆菌细胞质中抗体片段的可溶性表达进行系统筛选。
Microb Cell Fact. 2016 Jan 25;15:22. doi: 10.1186/s12934-016-0419-5.