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全基因组表达分析提示,高原环境下缺氧诱导的高凝状态可能导致静脉血栓形成。

Genome-Wide Expression Analysis Suggests Hypoxia-Triggered Hyper-Coagulation Leading to Venous Thrombosis at High Altitude.

机构信息

Defense Institute of Physiology and Allied Sciences, Defense Research and Development Organisation, Delhi, India.

Army Hospital (Research and Referral), New Delhi, India.

出版信息

Thromb Haemost. 2018 Jul;118(7):1279-1295. doi: 10.1055/s-0038-1657770. Epub 2018 Jun 4.

DOI:10.1055/s-0038-1657770
PMID:29864786
Abstract

Venous thromboembolism (VTE), a multi-factorial disease, is the third most common cardiovascular disease. Established genetic and acquired risk factors are responsible for the onset of VTE. High altitude (HA) also poses as an additional risk factor, predisposing individuals to VTE; however, its molecular mechanism remains elusive. This study aimed to identify genes/pathways associated with the pathophysiology of deep vein thrombosis (DVT) at HA. Gene expression profiling of DVT patients, who developed the disease, either at sea level or at HA-DVT locations, resulted in differential expression of 378 and 875 genes, respectively. Gene expression profiles were subjected to bioinformatic analysis, followed by technical and biological validation of selected genes using quantitative reverse transcription-polymerase chain reaction. Both gene ontology and pathway analysis showed enrichment of genes involved in haemostasis and platelet activation in HA-DVT patients with the most relevant pathway being 'response to hypoxia'. Thus, given the environmental condition the differential expression of hypoxia-responsive genes (angiogenin, ribonuclease, RNase A family, 5; early growth response 1; lamin A; matrix metallopeptidase 14 [membrane-inserted]; neurofibromin 1; PDZ and LIM domain 1; procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1; solute carrier family 6 [neurotransmitter transporter, serotonin], member 4; solute carrier family 9 [sodium/hydrogen exchanger], member 1; and TEK tyrosine kinase, endothelial) in HA-DVT could be a determining factor to understand the pathophysiology of DVT at HA.

摘要

静脉血栓栓塞症(VTE)是一种多因素疾病,是第三大常见的心血管疾病。已确定的遗传和获得性危险因素是 VTE 发病的原因。高海拔(HA)也是一个额外的危险因素,使个体易患 VTE;然而,其分子机制仍不清楚。本研究旨在确定与高海拔深静脉血栓形成(DVT)病理生理学相关的基因/途径。对在海平面或高海拔 DVT 部位发生疾病的 DVT 患者的基因表达谱进行分析,结果分别显示 378 个和 875 个基因的差异表达。对基因表达谱进行生物信息学分析,然后使用定量逆转录聚合酶链反应对选定基因进行技术和生物学验证。基因本体和途径分析均显示参与止血和血小板激活的基因富集,最相关的途径是“对缺氧的反应”。因此,鉴于环境条件,高海拔 DVT 患者中缺氧反应基因(血管生成素、核糖核酸酶、核糖核酸酶 A 家族成员 5、早期生长反应 1、层粘连蛋白 A、基质金属肽酶 14[膜插入]、神经纤维瘤 1、PDZ 和 LIM 结构域 1、原胶原赖氨酸 1、2-酮戊二酸 5-双加氧酶 1、溶质载体家族 6[神经递质转运体,血清素]成员 4、溶质载体家族 9[钠/氢交换体]成员 1 和 TEK 酪氨酸激酶,内皮)的差异表达可能是理解高海拔 DVT 病理生理学的决定因素。

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