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将非血红素铁辅因子插入反硝化假单胞菌的一氧化氮还原酶中,这依赖于NorQ和NorD辅助蛋白。

The insertion of the non-heme Fe cofactor into nitric oxide reductase from P. denitrificans depends on NorQ and NorD accessory proteins.

作者信息

Kahle Maximilian, Ter Beek Josy, Hosler Jonathan P, Ädelroth Pia

机构信息

Department of Biochemistry and Biophysics, Stockholm University, SE-106 91 Stockholm, Sweden.

Department of Cell and Molecular Biology, University of Mississippi Medical Center, Jackson, MS 39216, United States.

出版信息

Biochim Biophys Acta Bioenerg. 2018 Oct;1859(10):1051-1058. doi: 10.1016/j.bbabio.2018.05.020. Epub 2018 Jun 3.

DOI:10.1016/j.bbabio.2018.05.020
PMID:29874552
Abstract

Bacterial NO reductases (NOR) catalyze the reduction of NO into NO, either as a step in denitrification or as a detoxification mechanism. cNOR from Paracoccus (P.) denitrificans is expressed from the norCBQDEF operon, but only the NorB and NorC proteins are found in the purified NOR complex. Here, we established a new purification method for the P. denitrificans cNOR via a His-tag using heterologous expression in E. coli. The His-tagged enzyme is both structurally and functionally very similar to non-tagged cNOR. We were also able to express and purify cNOR from the structural genes norCB only, in absence of the accessory genes norQDEF. The produced protein is a stable NorCB complex containing all hemes and it can bind gaseous ligands (CO) to heme b, but it is catalytically inactive. We show that this deficient cNOR lacks the non-heme iron cofactor Fe. Mutational analysis of the nor gene cluster revealed that it is the norQ and norD genes that are essential to form functional cNOR. NorQ belongs to the family of MoxR P-loop AAA+ ATPases, which are in general considered to facilitate enzyme activation processes often involving metal insertion. Our data indicates that NorQ and NorD work together in order to facilitate non-heme Fe insertion. This is noteworthy since in many cases Fe cofactor binding occurs spontaneously. We further suggest a model for NorQ/D-facilitated metal insertion into cNOR.

摘要

细菌一氧化氮还原酶(NOR)催化将一氧化氮还原为一氧化二氮,这是反硝化作用的一个步骤或一种解毒机制。来自反硝化副球菌(P. denitrificans)的细胞色素c型NOR(cNOR)由norCBQDEF操纵子表达,但在纯化的NOR复合物中仅发现NorB和NorC蛋白。在这里,我们通过在大肠杆菌中进行异源表达,建立了一种利用His标签纯化反硝化副球菌cNOR的新方法。带有His标签的酶在结构和功能上与无标签的cNOR非常相似。我们还能够仅从结构基因norCB表达和纯化cNOR,而无需辅助基因norQDEF。产生的蛋白质是一种稳定的NorCB复合物,包含所有血红素,并且它可以将气态配体(CO)结合到血红素b上,但它没有催化活性。我们表明,这种有缺陷的cNOR缺乏非血红素铁辅因子Fe。对nor基因簇的突变分析表明,norQ和norD基因对于形成功能性cNOR至关重要。NorQ属于MoxR P环AAA + ATP酶家族,一般认为该家族有助于通常涉及金属插入的酶激活过程。我们的数据表明,NorQ和NorD共同作用以促进非血红素铁的插入。这是值得注意的,因为在许多情况下,铁辅因子的结合是自发发生的。我们进一步提出了一个NorQ / D促进金属插入cNOR的模型。

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