Department of Microbiology and Immunology, Indiana University School of Medicine, Indianapolis.
Global Public Health PhD Program, Nova University of Lisbon, Portugal.
Clin Infect Dis. 2018 Nov 13;67(11):1768-1774. doi: 10.1093/cid/ciy343.
Together with Treponema pallidum subspecies pertenue, Haemophilus ducreyi is a major cause of exudative cutaneous ulcers (CUs) in children. For H. ducreyi, both class I and class II strains, asymptomatic colonization, and environmental reservoirs have been found in endemic regions, but the epidemiology of this infection is unknown.
Based on published whole-genome sequences of H. ducreyi CU strains, a single-locus typing system was developed and applied to H. ducreyi-positive CU samples obtained prior to, 1 year after, and 2 years after the initiation of a mass drug administration campaign to eradicate CU on Lihir Island in Papua New Guinea. DNA from the CU samples was amplified with class I and class II dsrA-specific primers and sequenced; the samples were classified into dsrA types, which were geospatially mapped. Selection pressure analysis was performed on the dsrA sequences.
Thirty-seven samples contained class I sequences, 27 contained class II sequences, and 13 contained both. There were 5 class I and 4 class II types circulating on the island; 3 types accounted for approximately 87% of the strains. The composition and geospatial distribution of the types varied little over time and there was no evidence of selection pressure.
Multiple strains of H. ducreyi cause CU on an endemic island and coinfections are common. In contrast to recent findings with T. pallidum pertenue, strain composition is not affected by antibiotic pressure, consistent with environmental reservoirs of H. ducreyi. Such reservoirs must be addressed to achieve eradication of H. ducreyi.
除苍白密螺旋体亚种 pertenue 外,杜克嗜血杆菌也是儿童渗出性皮肤溃疡(CU)的主要病因。在流行地区,无论是 I 类还是 II 类菌株,都发现有无症状定植和环境储源,但这种感染的流行病学情况尚不清楚。
根据已发表的杜克嗜血杆菌 CU 株全基因组序列,开发了一种单基因座分型系统,并应用于巴布亚新几内亚利希尔岛大规模药物治疗根除 CU 之前、1 年和 2 年后获得的阳性 CU 样本。用 I 类和 II 类 dsrA 特异性引物扩增 CU 样本中的 DNA,并进行测序;根据 dsrA 型对样本进行分类,并对其进行地理空间映射。对 dsrA 序列进行选择压力分析。
37 个样本含有 I 类序列,27 个样本含有 II 类序列,13 个样本同时含有这两种序列。该岛上有 5 种 I 类和 4 种 II 类,约 87%的菌株为 3 种类型。各类型的组成和地理空间分布在时间上变化不大,也没有选择压力的证据。
多种杜克嗜血杆菌菌株导致流行地区的 CU,且合并感染很常见。与苍白密螺旋体 pertenue 的最新发现不同,菌株组成不受抗生素压力的影响,这与杜克嗜血杆菌的环境储源一致。必须解决这些储源问题,才能实现杜克嗜血杆菌的根除。