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利用同源提取物进行体外转录确定的粗糙脉孢菌RNA聚合酶I启动子的结构

Structure of a Neurospora RNA polymerase I promoter defined by transcription in vitro with homologous extracts.

作者信息

Tyler B M, Giles N H

出版信息

Nucleic Acids Res. 1985 Jun 25;13(12):4311-32. doi: 10.1093/nar/13.12.4311.

DOI:10.1093/nar/13.12.4311
PMID:2989792
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC321790/
Abstract

A Neurospora in vitro transcription system has been developed which specifically and efficiently initiates transcription of a cloned Neurospora crassa ribosomal RNA gene by RNA polymerase I. The initiation site of transcription (both in vitro and in vivo) appears to be located about 850 bp from the 5' end of mature 17S rRNA. However, the primary rRNA transcripts are normally cleaved very rapidly at a site 120-125 nt from the 5' end in vitro and in vivo. The nucleotide sequence surrounding the initiation site has been determined. The region from -16 to +9 exhibits partial homology to the corresponding sequences from a wide variety of organisms including yeast, but the most striking similarity is to the initiation region from Dictyostelium discoideum which displays 73% homology to the Neurospora sequence from -23 to +47. The Neurospora sequences from -96 to +97 have been shown to be sufficient for transcription. This region contains two sequences displaying 8/9 bp matches to elements of the 5S rDNA promoter.

摘要

已开发出一种粗糙脉孢菌体外转录系统,该系统能特异性且高效地通过RNA聚合酶I起始克隆的粗糙脉孢菌核糖体RNA基因的转录。转录起始位点(无论体外还是体内)似乎位于距成熟17S rRNA 5'端约850 bp处。然而,初级rRNA转录本在体外和体内通常会在距5'端120 - 125 nt的位点迅速被切割。已确定起始位点周围的核苷酸序列。从 -16到 +9的区域与包括酵母在内的多种生物的相应序列具有部分同源性,但最显著的相似性是与盘基网柄菌的起始区域,该区域与粗糙脉孢菌从 -23到 +47的序列显示出73%的同源性。已证明粗糙脉孢菌从 -96到 +97的序列足以进行转录。该区域包含两个与5S rDNA启动子元件显示8/9 bp匹配的序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/59e310d6f4b5/nar00306-0112-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/94ad70c2ea04/nar00306-0100-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/dbf03803a505/nar00306-0104-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/ef241c4fd1b2/nar00306-0105-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/84eefd912684/nar00306-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/24ce176e609e/nar00306-0110-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/59e310d6f4b5/nar00306-0112-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/94ad70c2ea04/nar00306-0100-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/dbf03803a505/nar00306-0104-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/ef241c4fd1b2/nar00306-0105-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/84eefd912684/nar00306-0107-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/24ce176e609e/nar00306-0110-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1087/321790/59e310d6f4b5/nar00306-0112-a.jpg

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本文引用的文献

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Multiple factors are required for the accurate transcription of purified genes by RNA polymerase III.RNA聚合酶III对纯化基因进行准确转录需要多种因素。
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A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region.5S RNA基因中心的一个控制区域指导转录的特异性起始:II. 该区域的3'边界。
哺乳动物核糖体RNA的初级加工涉及两个相邻的切割过程,且不具有物种特异性。
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Structure of the Bombyx mori rDNA: initiation site for its transcription.家蚕核糖体DNA的结构:其转录起始位点
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