Valle Mikel
Molecular Recognition and Host-Pathogen Interactions, Center for Cooperative Research in Biosciences, CIC bioGUNE, Derio, Spain.
Subcell Biochem. 2018;88:129-145. doi: 10.1007/978-981-10-8456-0_6.
Our understanding of the viral world changed just after the first structures of icosahedral viral particles were unveiled. The structural similarities between capsid proteins of distant viral groups were not anticipated, and the findings suggested the existence of common ancestors for viruses with different host range, genomic structure and multiplication strategies. This way, diverse viruses with icosahedral particles can now be grouped based on the structural homology between their capsid proteins. In the last years, the presence of conserved folds between viral proteins in non-icosahedral viruses has also emerged. Viral particles with radically different morphologies, ranging from naked and filamentous to enveloped and pleomorphic, have shown structural homology between the nucleoproteins that bind directly to their genomes. This chapter overviews recent findings regarding the similar structure found between nucleoproteins of eukaryotic ssRNA viruses. The structural homology includes the coat proteins from all known families of flexible filamentous plant viruses, a group with monopartite (+)ssRNA genomes. Their coat proteins share a core domain with nucleoproteins of previously unrelated families of enveloped viruses that have segmented (-)ssRNA genomes. This last group consists of mostly animals viruses, including influenza virus.
在二十面体病毒颗粒的首批结构被揭示之后,我们对病毒世界的认知发生了改变。远距离病毒群体的衣壳蛋白之间的结构相似性并未被预料到,这些发现表明具有不同宿主范围、基因组结构和增殖策略的病毒存在共同祖先。通过这种方式,现在可以基于其衣壳蛋白之间的结构同源性对具有二十面体颗粒的各种病毒进行分类。在过去几年中,非二十面体病毒的病毒蛋白之间也出现了保守折叠。具有从裸露丝状到包膜多形等截然不同形态的病毒颗粒,已显示出直接与其基因组结合的核蛋白之间的结构同源性。本章概述了关于真核单链RNA病毒核蛋白之间发现的相似结构的最新研究结果。这种结构同源性包括来自所有已知的柔性丝状植物病毒家族的衣壳蛋白,这是一个具有单分体(+)单链RNA基因组的群体。它们的衣壳蛋白与先前不相关的具有分段(-)单链RNA基因组的包膜病毒家族的核蛋白共享一个核心结构域。后一组主要由动物病毒组成,包括流感病毒。